Plant Transcription factor database - Universität Potsdam
version: 3.0

Gene model: GRMZM2G081919_P05

Identification

Species:
Zea mays
Gene model
GRMZM2G081919_P05
Family
MYB
3D structure (top 5)
1H89 1H8A 2K9N 1GV2 1OFC
PDB entry:

Genome Databases

Orthologs and co-orthologs (in-paralogs)

Look for sequence homologs using SIMAP@MIPS

SIMAP

Ortholog identification by INPARANOID

Arabidopsis lyrata

324904 Score: 1

Zea mays

GRMZM2G002571_P01 Score: 1
GRMZM2G081919_P05 Score: 1
GRMZM2G081919_P04 Score: 1
GRMZM2G081919_P03 Score: 1
GRMZM2G081919_P02 Score: 1
GRMZM2G081919_P01 Score: 1
GRMZM2G002571_P06 Score: 1
GRMZM2G002571_P05 Score: 1
GRMZM2G002571_P04 Score: 1
GRMZM2G002571_P03 Score: 1
GRMZM2G002571_P02 Score: 1
GRMZM2G081919_P06 Score: 1

Arabidopsis thaliana

AT3G09370.2 Score: 1
AT3G09370.1 Score: 0.969

Zea mays

GRMZM2G002571_P01 Score: 1
GRMZM2G081919_P05 Score: 1
GRMZM2G081919_P04 Score: 1
GRMZM2G081919_P03 Score: 1
GRMZM2G081919_P02 Score: 1
GRMZM2G081919_P01 Score: 1
GRMZM2G002571_P06 Score: 1
GRMZM2G002571_P05 Score: 1
GRMZM2G002571_P04 Score: 1
GRMZM2G002571_P03 Score: 1
GRMZM2G002571_P02 Score: 1
GRMZM2G081919_P06 Score: 1

Carica papaya

evm.TU.supercontig_228.18 Score: 1

Zea mays

GRMZM2G002571_P01 Score: 1
GRMZM2G081919_P05 Score: 1
GRMZM2G081919_P04 Score: 1
GRMZM2G081919_P03 Score: 1
GRMZM2G081919_P02 Score: 1
GRMZM2G081919_P01 Score: 1
GRMZM2G002571_P06 Score: 1
GRMZM2G002571_P05 Score: 1
GRMZM2G002571_P04 Score: 1
GRMZM2G002571_P03 Score: 1
GRMZM2G002571_P02 Score: 1
GRMZM2G081919_P06 Score: 1

Zea mays

GRMZM2G002571_P01 Score: 1
GRMZM2G081919_P05 Score: 1
GRMZM2G081919_P04 Score: 1
GRMZM2G081919_P03 Score: 1
GRMZM2G081919_P02 Score: 1
GRMZM2G081919_P01 Score: 1
GRMZM2G002571_P06 Score: 1
GRMZM2G002571_P05 Score: 1
GRMZM2G002571_P04 Score: 1
GRMZM2G002571_P03 Score: 1
GRMZM2G002571_P02 Score: 1
GRMZM2G081919_P06 Score: 1

Oryza sativa subsp. japonica

LOC_Os01g62410.1 Score: 1

Populus trichocarpa

801938 Score: 1

Zea mays

GRMZM2G002571_P01 Score: 1
GRMZM2G081919_P05 Score: 1
GRMZM2G081919_P04 Score: 1
GRMZM2G081919_P03 Score: 1
GRMZM2G081919_P02 Score: 1
GRMZM2G081919_P01 Score: 1
GRMZM2G002571_P06 Score: 1
GRMZM2G002571_P05 Score: 1
GRMZM2G002571_P04 Score: 1
GRMZM2G002571_P03 Score: 1
GRMZM2G002571_P02 Score: 1
GRMZM2G081919_P06 Score: 1

Sorghum bicolor

4880590 Score: 1

Zea mays

GRMZM2G002571_P01 Score: 1
GRMZM2G081919_P05 Score: 1
GRMZM2G081919_P04 Score: 1
GRMZM2G081919_P03 Score: 1
GRMZM2G081919_P02 Score: 1
GRMZM2G081919_P01 Score: 1
GRMZM2G002571_P06 Score: 1
GRMZM2G002571_P05 Score: 1
GRMZM2G002571_P04 Score: 1
GRMZM2G002571_P03 Score: 1
GRMZM2G002571_P02 Score: 1
GRMZM2G081919_P06 Score: 1

Zea mays

GRMZM2G002571_P01 Score: 1
GRMZM2G081919_P05 Score: 1
GRMZM2G081919_P04 Score: 1
GRMZM2G081919_P03 Score: 1
GRMZM2G081919_P02 Score: 1
GRMZM2G081919_P01 Score: 1
GRMZM2G002571_P06 Score: 1
GRMZM2G002571_P05 Score: 1
GRMZM2G002571_P04 Score: 1
GRMZM2G002571_P03 Score: 1
GRMZM2G002571_P02 Score: 1
GRMZM2G081919_P06 Score: 1

Vitis vinifera

GSVIVP00021320001 Score: 1

Expression data

Expressed Sequence Tags

At.11889
Arabidopsis thaliana putative MYB family transcription factor (At3g09370) mRNA, complete cds /cds=p(169,1686) /gb=AY034964
At.2235
Arabidopsis thaliana PC-MYB1 (myb domain protein 3R1); DNA binding / transcription factor (PC-MYB1) mRNA, complete cds /cds=p(309,3296) /gb=NM_202989
At.3762
Arabidopsis thaliana ATMYB3R2/MYB3R-2/PC-MYB2 (MYB DOMAIN PROTEIN 3R2, PUTATIVE C-MYB-LIKE TRANSCRIPTION FACTOR); DNA binding / transcription factor (ATMYB3R2/MYB3R-2/PC-MYB2) mRNA, complete cds /cds=p(227,1444) /gb=NM_178945
At.5132
Arabidopsis thaliana putative c-myb-like transcription factor MYB3R-4 (MYB3R4) mRNA, complete cds /cds=p(328,3213) /gb=AF371975
At.63784
Arabidopsis thaliana putative c-myb-like transcription factor MYB3R-5 (MYB3R5) mRNA, complete cds /cds=p(87,1733) /gb=AF371976
Hv.8676
Hordeum vulgare putative c-myb-like transcription factor (MYB3R-1) mRNA, partial cds /cds=p(1,592) /gb=AF189788
Mtr.22370
Medicago truncatula clone MTYFL_FM_FN_FO1G-A-18 unknown mRNA /cds=p(144,1844) /gb=BT053144
Os.22373
Oryza sativa Japonica Group cDNA, clone: J100066E24, full insert sequence /gb=AK318601
Os.23747
Oryza sativa (japonica cultivar-group) Os12g0238000 (Os12g0238000) mRNA, complete cds /cds=p(1,3483) /gb=NM_001073000
Os.38177
Oryza sativa Japonica Group cDNA clone:J013069B18, full insert sequence /gb=AK066520
Ppa.10
Physcomitrella patens putative c-myb-like transcription factor (MYB3R-1) mRNA, partial cds /cds=p(1,1797) /gb=AF189786

Domain Architecture

Myb_DNA-binding PF00249 GRMZM2G081919_P05
DomainStartEndBit scoreE-value
Myb_DNA-binding6511147.64.9e-11
Myb_DNA-binding11716357.74.3e-14
Myb_DNA-binding16921451.82.6e-12

Sequences