Plant Transcription factor database - Universität Potsdam
version: 3.0

Gene model: GRMZM2G083239_P01

Identification

Species:
Zea mays
Gene model
GRMZM2G083239_P01
Family
MYB
3D structure (top 5)
1H89 1H8A 2K9N 1GV2 2JUH
PDB entry:

Genome Databases

Orthologs and co-orthologs (in-paralogs)

Look for sequence homologs using SIMAP@MIPS

SIMAP

Ortholog identification by INPARANOID

Arabidopsis lyrata

899594 Score: 1

Zea mays

GRMZM2G083239_P01 Score: 1
GRMZM2G151321_P01 Score: 1

Expression data

Expressed Sequence Tags

At.10909
Arabidopsis thaliana MYB52 (myb domain protein 52); DNA binding / transcription factor (MYB52) mRNA, complete cds /cds=p(148,897) /gb=NM_101658
At.10910
Arabidopsis thaliana MYB54 (myb domain protein 54); DNA binding / transcription factor (MYB54) mRNA, complete cds /cds=p(221,952) /gb=NM_106001
At.15646
Arabidopsis thaliana MYB117 (myb domain protein 117); transcription factor (MYB117) mRNA, complete cds /cds=p(5,847) /gb=NM_102441
At.7331
Arabidopsis thaliana AtMYB56 (myb domain protein 56); DNA binding / transcription factor (AtMYB56) mRNA, complete cds /cds=p(59,1030) /gb=NM_121786
Os.49785
Oryza sativa Japonica Group cDNA clone:J013060F16, full insert sequence /cds=p(420,1157) /gb=AK111560
Os.80485
Oryza sativa (japonica cultivar-group) Os08g0435700 (Os08g0435700) mRNA, complete cds /cds=p(1,1110) /gb=NM_001068417

Domain Architecture

Myb_DNA-binding PF00249 GRMZM2G083239_P01
DomainStartEndBit scoreE-value
Myb_DNA-binding317746.97.6e-11
Myb_DNA-binding83128509.5e-12

Sequences