Plant Transcription factor database - Universität Potsdam
version: 3.0

Gene model: GRMZM2G085254_P01

Identification

Species:
Zea mays
Gene model
GRMZM2G085254_P01
Family
IWS1

Genome Databases

Orthologs and co-orthologs (in-paralogs)

Look for sequence homologs using SIMAP@MIPS

SIMAP

Ortholog identification by INPARANOID

Chlorella sp. NC64A

142536 Score: 1

Zea mays

GRMZM2G085254_P03 Score: 1
GRMZM2G085254_P01 Score: 0.987
GRMZM2G027061_P02 Score: 0.981
GRMZM2G100881_P02 Score: 0.981

Coccomyxa sp. C-169

82424 Score: 1

Zea mays

GRMZM2G027061_P02 Score: 1
GRMZM2G085254_P03 Score: 1
GRMZM2G100881_P02 Score: 1
GRMZM2G085254_P01 Score: 0.987

Ostreococcus tauri

11523 Score: 1

Zea mays

GRMZM2G085254_P03 Score: 1
GRMZM2G085254_P01 Score: 0.986
GRMZM2G027061_P02 Score: 0.98
GRMZM2G100881_P02 Score: 0.98

Physcomitrella patens

132629 Score: 1

Zea mays

GRMZM2G027061_P02 Score: 1
GRMZM2G085254_P01 Score: 1
GRMZM2G100881_P02 Score: 1

Populus trichocarpa

415152 Score: 1

Zea mays

GRMZM2G085254_P01 Score: 1
GRMZM2G027061_P02 Score: 0.947
GRMZM2G100881_P02 Score: 0.947

Sorghum bicolor

143023 Score: 1

Zea mays

GRMZM2G027061_P02 Score: 1
GRMZM2G085254_P01 Score: 1
GRMZM2G100881_P02 Score: 1

Vitis vinifera

GSVIVP00023696001 Score: 1

Expression data

Expressed Sequence Tags

At.43906
Arabidopsis thaliana unknown protein (AT1G32130) mRNA, complete cds /cds=p(80,1588) /gb=NM_102946
Hv.3071
BES1824105e11 BES1824 Hordeum vulgare subsp. vulgare cDNA clone MPMGp2010E115 5-PRIME, mRNA sequence /clone=MPMGp2010E11105 /clone_end=5' /gb=CK123756
Mtr.10897
EST507034 KV3 Medicago truncatula cDNA clone pKV3-46M17 5' end, mRNA sequence /clone=pKV3-46M17 /clone_end=5' /gb=BG645415
Os.70750
Oryza sativa Japonica Group cDNA clone:J033106E16, full insert sequence /gb=AK121921
Ppa.17098
CAYY32509.fwd CAYY Physcomitrella patens subsp. patens Villersexel - regular (H) Physcomitrella patens subsp. patens cDNA clone CAYY32509 5', mRNA sequence /clone=CAYY32509 /clone_end=5' /gb=FC360656
Sbi.4296
POL1_6_D12.g1_A002 Pollen Sorghum bicolor cDNA clone POL1_6_D12_A002 5', mRNA sequence /clone=POL1_6_D12_A002 /clone_end=5' /gb=CF482390 /gi=34511259
Vvi.13761
CAB70004_IIaF_H05 Cabernet Sauvignon Berry Post-Veraison - CAB7 Vitis vinifera cDNA clone CAB70004_IIaF_H05 5', mRNA sequence /clone=CAB70004_IIaF_H05 /clone_end=5' /gb=CB981338

Domain Architecture

IWS1_C PF05909 GRMZM2G085254_P01
DomainStartEndBit scoreE-value
IWS1_C247509472.46.3e-139

Sequences