Plant Transcription factor database - Universität Potsdam
version: 3.0

Gene model: GRMZM2G092765_P01

Identification

Species:
Zea mays
Gene model
GRMZM2G092765_P01
Family
SWI/SNF-BAF60b
3D structure (top 5)
2BZE 1V32 1WH2 2Z5S 1UHR
PDB entry:

Genome Databases

Orthologs and co-orthologs (in-paralogs)

Look for sequence homologs using SIMAP@MIPS

SIMAP

Ortholog identification by INPARANOID

Sorghum bicolor

4999057 Score: 1

Expression data

Expressed Sequence Tags

Hv.25150
BJ471970 K. Sato unpublished cDNA library, cv. Haruna Nijo adult, heading stage top three leaves Hordeum vulgare subsp. vulgare cDNA clone baal28n18 5', mRNA sequence /clone=baal28n18 /clone_end=5' /gb=BJ471970
Mtr.13307
EST647475 HOGA Medicago truncatula cDNA clone HOGA-32C15, mRNA sequence /clone=HOGA-32C15 /gb=CB894683
Os.78568
Oryza sativa (japonica cultivar-group) Os10g0511800 (Os10g0511800) mRNA, complete cds /cds=p(1,2118) /gb=NM_001071576
Os.86087
NEW_RNG123-D03 Rice mixture of leaf, root, panicle Oryza sativa (japonica cultivar-group) cDNA, mRNA sequence /gb=EE590805
Os.96422
SSH001438 Salt stress SSH library Oryza sativa (indica cultivar-group) cDNA, mRNA sequence /gb=EX451381
Sbi.13687
IP1_44_C05.b1_A002 Immature pannicle 1 (IP1) Sorghum bicolor cDNA, mRNA sequence /gb=BI141185
Sbi.2416
HS1_11_D04.g1_A012 Heat-shocked seedlings Sorghum bicolor cDNA clone HS1_11_D04_A012 5', mRNA sequence /clone=HS1_11_D04_A012 /clone_end=5' /gb=CD205067 /gi=30934757

Domain Architecture

AT_hook PF02178 GRMZM2G092765_P01
DomainStartEndBit scoreE-value
AT_hook71910.70.38
SWIB297372831.1e-21
Plus-3435541150.64.7e-42
GYF72377634.63.9e-07

Sequences