Plant Transcription factor database - Universität Potsdam
version: 3.0

Gene model: GRMZM2G094946_P01

Identification

Species:
Zea mays
Gene model
GRMZM2G094946_P01
Family
MYB
3D structure (top 5)
1H8A 2K9N 1GV2 1H89 2JUH
PDB entry:

Genome Databases

Orthologs and co-orthologs (in-paralogs)

Look for sequence homologs using SIMAP@MIPS

SIMAP

Ortholog identification by INPARANOID

Arabidopsis lyrata

897586 Score: 1

Arabidopsis thaliana

AT3G13540.1 Score: 1

Oryza sativa subsp. japonica

LOC_Os01g50110.1 Score: 1

Vitis vinifera

GSVIVP00024797001 Score: 1

Expression data

Expressed Sequence Tags

At.20521
Arabidopsis thaliana MYB4 (myb domain protein 4); transcription factor (MYB4) mRNA, complete cds /cds=p(316,1164) /gb=NM_120023
At.23277
Arabidopsis thaliana MYB3 (myb domain protein 3); DNA binding / transcription factor (MYB3) mRNA, complete cds /cds=p(95,868) /gb=NM_102111
At.28679
Arabidopsis thaliana AtMYB32 (myb domain protein 32); DNA binding / transcription factor (AtMYB32) mRNA, complete cds /cds=p(79,903) /gb=NM_119665
At.39401
Arabidopsis thaliana ATMYB5 (MYB DOMAIN PROTEIN 5); DNA binding / transcription factor (ATMYB5) mRNA, complete cds /cds=p(67,816) /gb=NM_112200
At.5349
Arabidopsis thaliana MYB7 (myb domain protein 7); DNA binding / transcription factor (MYB7) mRNA, complete cds /cds=p(31,840) /gb=NM_127224
At.974
Arabidopsis thaliana AtMYB17 (myb domain protein 17); DNA binding / transcription factor (AtMYB17) mRNA, complete cds /cds=p(305,1204) /gb=NM_115989
Hv.21121
H.vulgare myb2 mRNA /cds=p(44,799) /gb=X70876
Mtr.9208
Medicago truncatula clone MTYF9_FA_FB_FC1G-F-10 unknown mRNA /cds=m(91,948) /gb=BT052056
Os.10175
Oryza sativa (japonica cultivar-group) Os05g0429900 (Os05g0429900) mRNA, partial cds /cds=p(527,847) /gb=NM_001062156
Os.12875
Oryza sativa Japonica Group cDNA, clone: J090075I22, full insert sequence /gb=AK288851
Os.55528
Oryza sativa Japonica Group cDNA, clone: J090075I22, full insert sequence /gb=AK242866
Os.72787
CT852975 Oryza sativa (indica cultivar-group) cv. Guang Lu Ai 4 Oryza sativa (indica cultivar-group) cDNA clone OSIGCRN116K19, mRNA sequence /clone=OSIGCRN116K19 /gb=CT852975
Os.9336
CT849551 Oryza sativa (indica cultivar-group) cv. Guang Lu Ai 4 Oryza sativa (indica cultivar-group) cDNA clone CONTIG6869, mRNA sequence /clone=CONTIG6869 /gb=CT849551
Sbi.8066
WOUND1_59_F10.g1_A002 Wounded leaves Sorghum bicolor cDNA clone WOUND1_59_F10_A002 5', mRNA sequence /clone=WOUND1_59_F10_A002 /clone_end=5' /gb=CN148942 /gi=45990343
Vvi.12591
CAbud0005_IF_G09 Vitis vinifera cv. cabernet sauvignon (Clone 8) Bud - CABUD Vitis vinifera cDNA clone CAbud0005_IF_G09 5', mRNA sequence /clone=CAbud0005_IF_G09 /clone_end=5' /gb=CF512901
Vvi.3225
CAB30005_Ib_Fb_C02 Cabernet Sauvignon Berry Stage I - CAB3 Vitis vinifera cDNA clone CAB30005_Ib_Fb_C02 5', mRNA sequence /clone=CAB30005_Ib_Fb_C02 /clone_end=5' /gb=CB974921
Vvi.3370
Vitis vinifera MYB5b mRNA, complete cds /cds=p(31,966) /gb=AY899404

Domain Architecture

Myb_DNA-binding PF00249 GRMZM2G094946_P01
DomainStartEndBit scoreE-value
Myb_DNA-binding216848.13.5e-11
Myb_DNA-binding7411943.49.1e-10

Sequences