Plant Transcription factor database - Universität Potsdam
version: 3.0

Gene model: GRMZM2G095727_P05

Identification

Species:
Zea mays
Gene model
GRMZM2G095727_P05
Family
Pseudo ARR-B
3D structure (top 5)
3DZD 1MB3 2QXY 2PL1 3HDG
PDB entry:

Genome Databases

Orthologs and co-orthologs (in-paralogs)

Look for sequence homologs using SIMAP@MIPS

SIMAP

Ortholog identification by INPARANOID

Arabidopsis lyrata

908143 Score: 1

Zea mays

GRMZM2G095727_P05 Score: 1
GRMZM2G095727_P04 Score: 0.932

Arabidopsis thaliana

AT5G02810.1 Score: 1

Zea mays

GRMZM2G095727_P05 Score: 1
GRMZM2G095727_P04 Score: 0.932

Carica papaya

evm.TU.supercontig_1.279 Score: 1

Zea mays

GRMZM2G095727_P05 Score: 1
GRMZM2G095727_P04 Score: 0.928

Micromonas pusilla CCMP1545

48139 Score: 1

Zea mays

GRMZM2G095727_P05 Score: 1
GRMZM2G095727_P04 Score: 0.944

Oryza sativa subsp. japonica

LOC_Os03g17570.1 Score: 1
LOC_Os03g17570.2 Score: 1
LOC_Os03g17570.3 Score: 1

Populus trichocarpa

832516 Score: 1

Zea mays

GRMZM2G095727_P05 Score: 1
GRMZM2G095727_P04 Score: 0.922

Sorghum bicolor

5049663 Score: 1

Zea mays

GRMZM2G095727_P05 Score: 1
GRMZM2G095727_P04 Score: 0.923

Vitis vinifera

GSVIVP00024444001 Score: 1

Expression data

Expressed Sequence Tags

At.1676
Arabidopsis thaliana APRR3 (PSEUDO-RESPONSE REGULATOR 3); transcription regulator (APRR3) mRNA, complete cds /cds=p(397,1884) /gb=NM_125403
Hv.21000
Hordeum vulgare subsp. vulgare cDNA clone: FLbaf75k13, mRNA sequence /gb=AK250331
Hv.4918
Hordeum vulgare subsp. vulgare cDNA clone: FLbaf137g14, mRNA sequence /gb=AK252005
Os.58539
Oryza sativa Japonica Group cDNA clone:J023077E22, full insert sequence /gb=AK121136
Os.59215
Oryza sativa Japonica Group cDNA clone:J013051N02, full insert sequence /gb=AK066112
Os.80771
Oryza sativa Japonica Group cDNA clone:J013102G21, full insert sequence /cds=p(267,2138) /gb=AK067314
Os.85783
CI382639 Oryza sativa (japonica cultivar-group) callus Oryza sativa (japonica cultivar-group) cDNA clone J03B3103N06M3 3', mRNA sequence /clone=J03B3103N06M3 /clone_end=3' /gb=CI382639
Os.89815
69527rsicem_14847.y1 Oryza sativa cv. PA64s panicle ferile cDNA library Oryza sativa (indica cultivar-group) cDNA 5', mRNA sequence /clone_end=5' /gb=CK071777
Pba.9585
WS01229.BR_H11 PT-GT-FL-A-3 Populus trichocarpa cDNA clone WS01229_H11 5', mRNA sequence /clone=WS01229_H11 /clone_end=5' /gb=DT473373
Ppa.3166
Physcomitrella patens subsp. patens circadian clock protein PRR1 (PpPRR1) mRNA, partial cds /cds=p(1,1278) /gb=XM_001784561
Ppa.4916
Physcomitrella patens subsp. patens circadian clock protein PRR4 (PpPRR4) mRNA, complete cds /cds=p(1,3171) /gb=XM_001766053
Ppa.9703
Physcomitrella patens subsp. patens circadian clock protein PRR2 (PpPRR2) mRNA, complete cds /cds=p(1,3432) /gb=XM_001766050
Pth.16941
WS01229.BR_H11 PT-GT-FL-A-3 Populus trichocarpa cDNA clone WS01229_H11 5', mRNA sequence /clone=WS01229_H11 /clone_end=5' /gb=DT473373
Sbi.10157
PIC1_53_A05.b1_A002 Pathogen-infected compatible 1 (PIC1) Sorghum bicolor cDNA, mRNA sequence /gb=BM325806
Sbi.12562
PH1_17_C03.g1_A002 Phosphorous-deficient seedlings Sorghum bicolor cDNA clone PH1_17_C03_A002 5', mRNA sequence /clone=PH1_17_C03_A002 /clone_end=5' /gb=CF428768 /gi=34441469
Vvi.23600
CA12EI204IIF_C02 Cabernet Sauvignon Leaf - CA12EI Vitis vinifera cDNA clone CA12EI204IIF_C02 5', mRNA sequence /clone=CA12EI204IIF_C02 /clone_end=5' /gb=CA815595

Domain Architecture

Response_reg PF00072 GRMZM2G095727_P05
DomainStartEndBit scoreE-value
Response_reg8519983.95.5e-22
CCT71175584.73.3e-22

Sequences