Plant Transcription factor database - Universität Potsdam
version: 3.0

Gene model: GRMZM2G098696_P01

Identification

Species:
Zea mays
Gene model
GRMZM2G098696_P01
Family
HSF
3D structure (top 5)
1HKS 3HTS
PDB entry:

Genome Databases

Orthologs and co-orthologs (in-paralogs)

Look for sequence homologs using SIMAP@MIPS

SIMAP

Ortholog identification by INPARANOID

Arabidopsis lyrata

911518 Score: 1
919451 Score: 1

Zea mays

GRMZM2G098696_P01 Score: 1
GRMZM2G164909_P01 Score: 1
GRMZM2G098696_P02 Score: 0.981

Arabidopsis thaliana

AT4G11660.1 Score: 1
AT5G62020.1 Score: 1

Zea mays

GRMZM2G098696_P01 Score: 1
GRMZM2G164909_P01 Score: 1
GRMZM2G098696_P02 Score: 0.982

Zea mays

GRMZM2G098696_P01 Score: 1
GRMZM2G098696_P02 Score: 0.967

Oryza sativa subsp. japonica

LOC_Os08g43334.1 Score: 1
LOC_Os08g43334.2 Score: 1

Sorghum bicolor

4987776 Score: 1

Zea mays

GRMZM2G098696_P01 Score: 1
GRMZM2G098696_P02 Score: 0.97

Expression data

Expressed Sequence Tags

At.49954
Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB79ZF11 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) /gb=BX814533
At.5365
Arabidopsis thaliana HSF4 (HEAT SHOCK FACTOR 4); DNA binding / transcription factor (HSF4) mRNA, complete cds /cds=p(484,1338) /gb=NM_119862
Hv.15777
Hordeum vulgare subsp. vulgare cDNA clone: FLbaf178m14, mRNA sequence /gb=AK248436
Mtr.10591
EST1225248 MTY Medicago truncatula cDNA clone MTYAF37, mRNA sequence /clone=MTYAF37 /gb=DW016287
Os.11941
Oryza sativa Japonica Group cDNA clone:002-108-F03, full insert sequence /gb=AK106545
Os.27716
Oryza sativa (japonica cultivar-group) Os08g0546800 (Os08g0546800) mRNA, complete cds /cds=p(6,1856) /gb=NM_001068958
Os.50642
Oryza sativa (japonica cultivar-group) heat shock factor RHSF1 mRNA, complete cds /cds=p(122,988) /gb=AY344483

Domain Architecture

HSF_DNA-bind PF00447 GRMZM2G098696_P01
DomainStartEndBit scoreE-value
HSF_DNA-bind35241153.18.2e-43

Sequences