Plant Transcription factor database - Universität Potsdam
version: 3.0

Gene model: GRMZM2G099622_P03

Identification

Species:
Zea mays
Gene model
GRMZM2G099622_P03
Family
C3H
3D structure (top 5)
1S70 2F8Y 2FO1 3D9H 1YCS
PDB entry:

Genome Databases

Orthologs and co-orthologs (in-paralogs)

Look for sequence homologs using SIMAP@MIPS

SIMAP

Ortholog identification by INPARANOID

Micromonas pusilla CCMP1545

67715 Score: 1

Ostreococcus lucimarinus

24342 Score: 1

Ostreococcus tauri

23564 Score: 1

Expression data

Expressed Sequence Tags

At.23950
Arabidopsis thaliana zinc finger (CCCH-type) family protein (AT2G41900) mRNA, complete cds /cds=p(317,2467) /gb=NM_129754
Hv.23976
HVSMEc0016D15f Hordeum vulgare seedling shoot EST library HVcDNA0003 (Etiolated and unstressed) Hordeum vulgare subsp. vulgare cDNA clone HVSMEc0016D15f, mRNA sequence /clone=HVSMEc0016D15f /gb=BG310058
Mtr.12130
EST646389 HOGA Medicago truncatula cDNA clone HOGA-28M8, mRNA sequence /clone=HOGA-28M8 /gb=CB893597
Os.11774
Oryza sativa Japonica Group cDNA clone:001-202-E04, full insert sequence /cds=p(173,1978) /gb=AK105767
Os.14948
Oryza sativa Japonica Group cDNA clone:J013123G12, full insert sequence /cds=p(251,2224) /gb=AK067895
Os.74292
Oryza sativa (japonica cultivar-group) Os03g0698800 (Os03g0698800) mRNA, complete cds /cds=p(596,2890) /gb=NM_001057517
Os.80954
Oryza sativa Japonica Group cDNA, clone: J043017N22, full insert sequence /gb=AK287452
Pth.2984
Populus trichocarpa clone WS01121_A14 unknown mRNA /cds=p(146,2278) /gb=EF145149
Sbi.17965
LG1_292_E12.b1_A002 Light Grown 1 (LG1) Sorghum bicolor cDNA, mRNA sequence /gb=AW564424

Domain Architecture

Ank PF00023 GRMZM2G099622_P03
DomainStartEndBit scoreE-value
Ank73106220.0025
Ank10814331.24.3e-06
zf-CCCH27830433.39.7e-07
zf-CCCH3143360.41.4

Sequences