Plant Transcription factor database - Universität Potsdam
version: 3.0

Gene model: GRMZM2G105807_P03

Identification

Species:
Zea mays
Gene model
GRMZM2G105807_P03
Family
ARID
3D structure (top 5)
1C20 2EQY 2JRZ 2JXJ 1IG6
PDB entry:

Genome Databases

Orthologs and co-orthologs (in-paralogs)

Look for sequence homologs using SIMAP@MIPS

SIMAP

INPARANOID could not detect any orthologs for this gene model

Expression data

Expressed Sequence Tags

At.12107
Arabidopsis thaliana mRNA for hypothetical protein, complete cds, clone: RAFL24-09-F03 /cds=p(181,2541) /gb=AK176382
At.34646
Arabidopsis thaliana ARID/BRIGHT DNA-binding domain-containing protein (AT1G76510) mRNA, complete cds /cds=p(230,1534) /gb=NM_106301
Hv.19293
AV942153 K. Sato unpublished cDNA library, strain H602 adult, heading stage top three leaves Hordeum vulgare subsp. spontaneum cDNA clone bah39l11 5', mRNA sequence /clone=bah39l11 /clone_end=5' /gb=AV942153
Hv.5829
Hordeum vulgare subsp. vulgare cDNA clone: FLbaf46h03, mRNA sequence /gb=AK249562
Mtr.2072
s13dNF98D03MJ027_246106 Methyl Jasmonate-Elicited Root Cell Suspension Culture Medicago truncatula cDNA, mRNA sequence /gb=CX530035
Os.12814
Oryza sativa Japonica Group cDNA clone:J013170P10, full insert sequence /cds=p(442,1827) /gb=AK099075
Os.54897
Oryza sativa Japonica Group cDNA clone:002-121-B09, full insert sequence /gb=AK107036
Ppa.226
Physcomitrella patens subsp. patens ARID/BRIGHT DNA-binding domain-containing protein (ARID1503) mRNA, partial cds /cds=p(1,897) /gb=XM_001770901

Domain Architecture

ARID PF01388 GRMZM2G105807_P03
DomainStartEndBit scoreE-value
ARID16026833.88.3e-08

Sequences