Plant Transcription factor database - Universität Potsdam
version: 3.0

Gene model: GRMZM2G106257_P01

Identification

Species:
Zea mays
Gene model
GRMZM2G106257_P01
Family
SWI/SNF-BAF60b
3D structure (top 5)
2BZE 1V32 2Z5S 1UHR 1V31
PDB entry:

Genome Databases

Orthologs and co-orthologs (in-paralogs)

Look for sequence homologs using SIMAP@MIPS

SIMAP

Ortholog identification by INPARANOID

Arabidopsis lyrata

319846 Score: 1

Arabidopsis thaliana

AT2G16480.1 Score: 1

Carica papaya

evm.TU.supercontig_150.25 Score: 1

Physcomitrella patens

146214 Score: 1

Populus trichocarpa

195668 Score: 1
201097 Score: 1

Vitis vinifera

GSVIVP00036834001 Score: 1

Expression data

Expressed Sequence Tags

Hv.25150
BJ471970 K. Sato unpublished cDNA library, cv. Haruna Nijo adult, heading stage top three leaves Hordeum vulgare subsp. vulgare cDNA clone baal28n18 5', mRNA sequence /clone=baal28n18 /clone_end=5' /gb=BJ471970
Mtr.13307
EST647475 HOGA Medicago truncatula cDNA clone HOGA-32C15, mRNA sequence /clone=HOGA-32C15 /gb=CB894683
Os.78568
Oryza sativa (japonica cultivar-group) Os10g0511800 (Os10g0511800) mRNA, complete cds /cds=p(1,2118) /gb=NM_001071576
Os.86087
NEW_RNG123-D03 Rice mixture of leaf, root, panicle Oryza sativa (japonica cultivar-group) cDNA, mRNA sequence /gb=EE590805
Os.96422
SSH001438 Salt stress SSH library Oryza sativa (indica cultivar-group) cDNA, mRNA sequence /gb=EX451381

Domain Architecture

SWIB PF02201 GRMZM2G106257_P01
DomainStartEndBit scoreE-value
SWIB204279831.1e-21
Plus-3342448150.64.7e-42

Sequences