Plant Transcription factor database - Universität Potsdam
version: 3.0

Gene model: GRMZM2G117458_P01

Identification

Species:
Zea mays
Gene model
GRMZM2G117458_P01
Family
SET
3D structure (top 5)
2PB7 2R3A 1ML9 3F9X 2RFI
PDB entry:

Genome Databases

Orthologs and co-orthologs (in-paralogs)

Look for sequence homologs using SIMAP@MIPS

SIMAP

Ortholog identification by INPARANOID

Sorghum bicolor

5060718 Score: 1

Expression data

Expressed Sequence Tags

At.8375
Arabidopsis thaliana SUVH1 (SUVH1) mRNA, complete cds /cds=p(363,2375) /gb=AF344444
Hv.2567
Hordeum vulgare subsp. vulgare cDNA clone: FLbaf52h10, mRNA sequence /gb=AK249824
Hv.29295
AL506577 Hordeum vulgare Barke developing caryopsis (3.-15.DAP) Hordeum vulgare subsp. vulgare cDNA clone HY03J09T 5', mRNA sequence /clone=HY03J09 /clone_end=5' /gb=AL506577
Os.11922
Oryza sativa Japonica Group cDNA clone:J023004N15, full insert sequence /cds=p(280,2298) /gb=AK069035
Os.3123
Oryza sativa Japonica Group cDNA clone:001-026-A12, full insert sequence /gb=AK059336
Os.35901
Oryza sativa Japonica Group cDNA clone:J013002H03, full insert sequence /gb=AK065227
Os.97866
Oryza sativa Japonica Group cDNA clone:J033092A08, full insert sequence /cds=p(393,2834) /gb=AK102379
Vvi.14480
WIN1127.C21_D07 Muscat Hamburg pre-veraison berry normalized (WIN11) Vitis vinifera cDNA clone WIN1127_D07 3', mRNA sequence /clone=WIN1127_D07 /clone_end=3' /gb=EC986263

Domain Architecture

YDG_SRA PF02182 GRMZM2G117458_P01
DomainStartEndBit scoreE-value
YDG_SRA2123673321.2e-96
Pre-SET394494145.22.1e-40
SET496652171.72.1e-48

Sequences