Plant Transcription factor database - Universität Potsdam
version: 3.0

Gene model: GRMZM2G127857_P01

Identification

Species:
Zea mays
Gene model
GRMZM2G127857_P01
Family
MYB
3D structure (top 5)
1H89 1H8A 2K9N 1GV2 2JUH
PDB entry:

Genome Databases

Orthologs and co-orthologs (in-paralogs)

Look for sequence homologs using SIMAP@MIPS

SIMAP

Ortholog identification by INPARANOID

Arabidopsis thaliana

AT3G23250.1 Score: 1

Zea mays

GRMZM2G095904_P01 Score: 1
GRMZM2G127857_P01 Score: 1

Populus trichocarpa

816086 Score: 1

Sorghum bicolor

4808987 Score: 1

Vitis vinifera

GSVIVP00020265001 Score: 1

Expression data

Expressed Sequence Tags

At.10919
Arabidopsis thaliana AtMYB72/MYB72 (myb domain protein 72); DNA binding / transcription factor (AtMYB72/MYB72) mRNA, complete cds /cds=p(1,891) /gb=NM_104495
At.2261
Arabidopsis thaliana ATM4/ATMYB102 (ARABIDOPSIS MYB-LIKE 102); DNA binding / transcription factor (ATM4/ATMYB102) mRNA, complete cds /cds=p(109,1161) /gb=NM_118264
At.42352
Arabidopsis thaliana ATMYB13 (myb domain protein 13); DNA binding / transcription factor (ATMYB13) mRNA, complete cds /cds=p(103,843) /gb=NM_100499
At.974
Arabidopsis thaliana AtMYB17 (myb domain protein 17); DNA binding / transcription factor (AtMYB17) mRNA, complete cds /cds=p(305,1204) /gb=NM_115989
At.9932
Arabidopsis thaliana AtMYB9 (myb domain protein 9); DNA binding (AtMYB9) mRNA, complete cds /cds=p(326,1336) /gb=NM_203063
Hv.20690
H.vulgare mRNA for myb4 transcription factor /cds=p(1,869) /gb=X99973
Hv.26842
Hordeum vulgare subsp. vulgare cDNA clone: FLbaf97l09, mRNA sequence /gb=AK248579
Hv.27175
Hordeum vulgare subsp. vulgare cDNA clone: FLbaf178a22, mRNA sequence /gb=AK248649
Hv.4463
HC114B11_SK.ab1 HC Hordeum vulgare subsp. vulgare cDNA clone HC114B11_SK.ab1 similar to myb protein homolog - rice gi|1946265|emb|CAA72217.1| (Y11414) myb [Oryza sativa], mRNA sequence /clone=HC114B11_SK.ab1 /gb=BM816803
Mtr.18532
NF063H10EC1F1091 Elicited cell culture Medicago truncatula cDNA clone NF063H10EC 5', mRNA sequence /clone=NF063H10EC /clone_end=5' /gb=BF644340
Mtr.4790
EST1227002 MTY Medicago truncatula cDNA clone MTYB151, mRNA sequence /clone=MTYB151 /gb=DW018041
Os.10172
CT857440 Oryza sativa (indica cultivar-group) cv. Guang Lu Ai 4 Oryza sativa (indica cultivar-group) cDNA clone OSIGCRN106M14, mRNA sequence /clone=OSIGCRN106M14 /gb=CT857440
Os.84391
Oryza sativa Japonica Group cDNA clone:001-031-D02, full insert sequence /gb=AK111960
Sbi.3364
WOUND1_65_D11.g1_A002 Wounded leaves Sorghum bicolor cDNA clone WOUND1_65_D11_A002 5', mRNA sequence /clone=WOUND1_65_D11_A002 /clone_end=5' /gb=CN149909 /gi=45991895

Domain Architecture

Myb_DNA-binding PF00249 GRMZM2G127857_P01
DomainStartEndBit scoreE-value
Myb_DNA-binding146155.91.5e-13
Myb_DNA-binding6711239.71.2e-08

Sequences