Plant Transcription factor database - Universität Potsdam
version: 3.0

Gene model: GRMZM2G133806_P03

Identification

Species:
Zea mays
Gene model
GRMZM2G133806_P03
Family
LOB

Genome Databases

Orthologs and co-orthologs (in-paralogs)

Look for sequence homologs using SIMAP@MIPS

SIMAP

Ortholog identification by INPARANOID

Carica papaya

evm.TU.supercontig_108.60 Score: 1
evm.TU.supercontig_6.411 Score: 1

Zea mays

GRMZM2G118250_P03 Score: 1
GRMZM2G118250_P04 Score: 1
GRMZM2G118250_P05 Score: 1
GRMZM2G118250_P06 Score: 1
GRMZM2G133806_P01 Score: 1
GRMZM2G133806_P03 Score: 1
GRMZM2G133806_P02 Score: 0.989
GRMZM2G133806_P04 Score: 0.989
GRMZM2G133806_P05 Score: 0.989

Populus trichocarpa

659394 Score: 1
656362 Score: 0.908

Zea mays

GRMZM2G133806_P01 Score: 1
GRMZM2G133806_P03 Score: 1
GRMZM2G133806_P02 Score: 0.988
GRMZM2G133806_P04 Score: 0.988
GRMZM2G133806_P05 Score: 0.988

Expression data

Expressed Sequence Tags

At.27203
Arabidopsis thaliana AS2 (ASYMMETRIC LEAVES 2) (AS2) mRNA, complete cds /cds=p(558,1157) /gb=NM_105235
At.28843
Arabidopsis thaliana ASL1 (LATERAL ORGAN BOUNDARIES domain gene 36) (ASL1) mRNA, complete cds /cds=p(318,1259) /gb=NM_126086
At.66237
Arabidopsis thaliana ASL2 mRNA for ASYMMETRIC LEAVES2-like 2 protein, complete cds /cds=p(139,1074) /gb=AB473835
Hv.29571
HI13F15r HI Hordeum vulgare subsp. vulgare cDNA clone HI13F15 5-PRIME, mRNA sequence /clone=HI13F15 /clone_end=5' /gb=BU999123
Os.18459
Oryza sativa Japonica Group cDNA clone:002-117-B04, full insert sequence /cds=p(469,1278) /gb=AK119575
Os.82290
Oryza sativa (japonica cultivar-group) Os05g0417000 (Os05g0417000) mRNA, complete cds /cds=p(1,840) /gb=NM_001062094
Pba.1740
WS02510.B21_B24 PT-MB-N-A-15 Populus trichocarpa cDNA clone WS02510_B24 3', mRNA sequence /clone=WS02510_B24 /clone_end=3' /gb=CV240709
Pba.9054
WS02521.B21_E04 PT-MB-N-A-15 Populus trichocarpa cDNA clone WS02521_E04 3', mRNA sequence /clone=WS02521_E04 /clone_end=3' /gb=DT482959
Pth.1740
WS02510.B21_B24 PT-MB-N-A-15 Populus trichocarpa cDNA clone WS02510_B24 3', mRNA sequence /clone=WS02510_B24 /clone_end=3' /gb=CV240709
Pth.9054
WS02521.B21_E04 PT-MB-N-A-15 Populus trichocarpa cDNA clone WS02521_E04 3', mRNA sequence /clone=WS02521_E04 /clone_end=3' /gb=DT482959
Sbi.5472
POL1_69_G11.g1_A002 Pollen Sorghum bicolor cDNA clone POL1_69_G11_A002 5', mRNA sequence /clone=POL1_69_G11_A002 /clone_end=5' /gb=CF481082 /gi=34509951

Domain Architecture

DUF260 PF03195 GRMZM2G133806_P03
DomainStartEndBit scoreE-value
DUF26033133226.28.4e-65

Sequences