Plant Transcription factor database - Universität Potsdam
version: 3.0

Gene model: GRMZM2G134383_P03

Identification

Species:
Zea mays
Gene model
GRMZM2G134383_P03
Family
NAC
3D structure (top 5)
1UT7
PDB entry:

Genome Databases

Orthologs and co-orthologs (in-paralogs)

Look for sequence homologs using SIMAP@MIPS

SIMAP

Ortholog identification by INPARANOID

Arabidopsis lyrata

496302 Score: 1

Zea mays

GRMZM2G009892_P01 Score: 1
GRMZM2G009892_P02 Score: 1
GRMZM2G009892_P03 Score: 1
GRMZM2G134383_P01 Score: 1
GRMZM2G134383_P02 Score: 1
GRMZM2G134383_P03 Score: 1

Arabidopsis thaliana

AT5G61430.1 Score: 1

Zea mays

GRMZM2G009892_P01 Score: 1
GRMZM2G009892_P02 Score: 1
GRMZM2G009892_P03 Score: 1
GRMZM2G134383_P01 Score: 1
GRMZM2G134383_P02 Score: 1
GRMZM2G134383_P03 Score: 1

Carica papaya

evm.TU.supercontig_14.99 Score: 1

Zea mays

GRMZM2G009892_P01 Score: 1
GRMZM2G009892_P02 Score: 1
GRMZM2G009892_P03 Score: 1
GRMZM2G134383_P01 Score: 1
GRMZM2G134383_P02 Score: 1
GRMZM2G134383_P03 Score: 1

Zea mays

GRMZM2G009892_P01 Score: 1
GRMZM2G009892_P02 Score: 1
GRMZM2G009892_P03 Score: 1
GRMZM2G134383_P01 Score: 1
GRMZM2G134383_P02 Score: 1
GRMZM2G134383_P03 Score: 1

Oryza sativa subsp. japonica

LOC_Os04g38720.1 Score: 1

Physcomitrella patens

149044 Score: 1

Zea mays

GRMZM2G009892_P01 Score: 1
GRMZM2G009892_P02 Score: 1
GRMZM2G009892_P03 Score: 1
GRMZM2G134383_P01 Score: 1
GRMZM2G134383_P02 Score: 1
GRMZM2G134383_P03 Score: 1

Sorghum bicolor

5006368 Score: 1

Zea mays

GRMZM2G009892_P01 Score: 1
GRMZM2G009892_P02 Score: 1
GRMZM2G009892_P03 Score: 1
GRMZM2G134383_P01 Score: 1
GRMZM2G134383_P02 Score: 1
GRMZM2G134383_P03 Score: 1

Zea mays

GRMZM2G009892_P01 Score: 1
GRMZM2G009892_P02 Score: 1
GRMZM2G009892_P03 Score: 1
GRMZM2G134383_P01 Score: 1
GRMZM2G134383_P02 Score: 1
GRMZM2G134383_P03 Score: 1

Vitis vinifera

GSVIVP00016312001 Score: 1

Expression data

Expressed Sequence Tags

At.24490
Arabidopsis thaliana putative NAM / CUC2 protein (At5g39610) mRNA, complete cds /cds=p(124,981) /gb=AY056327
At.27282
Arabidopsis thaliana ANAC059/ATNAC3 (Arabidopsis NAC domain containing protein 59); protein heterodimerization/ transcription factor (ANAC059/ATNAC3) mRNA, complete cds /cds=p(175,1131) /gb=NM_113825
At.53370
47-L020254-065-002-G06-SeLA MPIZ-ADIS-065d Arabidopsis thaliana cDNA clone 002-G06, mRNA sequence /clone=002-G06 /gb=DR750602
At.55538
Arabidopsis thaliana CUC2 (CUP-SHAPED COTYLEDON 2); transcription factor (CUC2) mRNA, complete cds /cds=p(29,1156) /gb=NM_124774
At.5743
Arabidopsis thaliana CUC1 (CUP-SHAPED COTYLEDON1); transcription factor (CUC1) mRNA, complete cds /cds=p(30,962) /gb=NM_112380
Os.15708
Oryza sativa (indica cultivar-group) cDNA clone:OSIGCRA218A09, full insert sequence /gb=CT830107
Os.18337
Oryza sativa Japonica Group cDNA clone:002-127-E05, full insert sequence /gb=AK107407
Os.51378
Oryza sativa Japonica Group cDNA clone:001-105-G11, full insert sequence /cds=p(105,1076) /gb=AK062675
Os.61729
Oryza sativa Japonica Group cDNA, clone: J065117E22, full insert sequence /gb=AK287666
Os.7235
Oryza sativa Japonica Group cDNA clone:J013046E14, full insert sequence /cds=p(181,1257) /gb=AK065989
Os.7362
Oryza sativa Japonica Group cDNA clone:J033072L16, full insert sequence /cds=p(191,1096) /gb=AK073876
Os.9492
Oryza sativa (indica cultivar-group) cDNA clone:OSIGCSA021O03, full insert sequence /gb=CT834765
Sbi.1420
PH1_10_C03.g1_A002 Phosphorous-deficient seedlings Sorghum bicolor cDNA clone PH1_10_C03_A002 5', mRNA sequence /clone=PH1_10_C03_A002 /clone_end=5' /gb=CF427746 /gi=34440447
Sbi.7063
ANR1_2_E11.g1_A002 Anaerobic roots Sorghum bicolor cDNA clone ANR1_2_E11_A002 5', mRNA sequence /clone=ANR1_2_E11_A002 /clone_end=5' /gb=CX606383 /gi=57803843

Domain Architecture

NAM PF02365 GRMZM2G134383_P03
DomainStartEndBit scoreE-value
NAM11137293.74.1e-85

Sequences