Plant Transcription factor database - Universität Potsdam
version: 3.0

Gene model: GRMZM2G138115_P01

Identification

Species:
Zea mays
Gene model
GRMZM2G138115_P01
Family
SET
3D structure (top 5)
1ML9 3H6L 2W5Y 1MVH 3BO5
PDB entry:

Genome Databases

Orthologs and co-orthologs (in-paralogs)

Look for sequence homologs using SIMAP@MIPS

SIMAP

Ortholog identification by INPARANOID

Arabidopsis lyrata

477698 Score: 1

Arabidopsis thaliana

AT3G04380.1 Score: 1
AT3G04380.2 Score: 1

Zea mays

GRMZM2G000408_P01 Score: 1
GRMZM2G008654_P01 Score: 1
GRMZM2G061059_P01 Score: 1
GRMZM2G138115_P01 Score: 1

Populus trichocarpa

243333 Score: 1

Sorghum bicolor

5058868 Score: 1

Zea mays

GRMZM2G016901_P01 Score: 1
GRMZM2G061709_P01 Score: 1
GRMZM2G138115_P01 Score: 1

Vitis vinifera

GSVIVP00020336001 Score: 1
GSVIVP00028515001 Score: 1

Expression data

Expressed Sequence Tags

At.27206
Arabidopsis thaliana Su(VAR)3-9-related protein 4 (SUVR4) mRNA, complete cds /cds=p(216,1682) /gb=AF408062
Ppa.19113
Physcomitrella patens subsp. patens predicted protein (PHYPADRAFT_3159) mRNA, partial cds /cds=p(1,966) /gb=XM_001785757
Vvi.20659
WIN0534.C21_N01 Cab Sauv flower, leaf and root normalized (WIN05) Vitis vinifera cDNA clone WIN0534_N01 3', mRNA sequence /clone=WIN0534_N01 /clone_end=3' /gb=EC945442

Domain Architecture

WIYLD PF10440 GRMZM2G138115_P01
DomainStartEndBit scoreE-value
WIYLD16272.71.4e-18
Pre-SET41055912.73.8e-05
SET561706122.61.3e-33

Sequences