Plant Transcription factor database - Universität Potsdam
version: 3.0

Gene model: GRMZM2G139710_P01

Identification

Species:
Zea mays
Gene model
GRMZM2G139710_P01
Family
SET
3D structure (top 5)
1ML9 3F9X 2RFI 1MVH 3FDE
PDB entry:

Genome Databases

Orthologs and co-orthologs (in-paralogs)

Look for sequence homologs using SIMAP@MIPS

SIMAP

Ortholog identification by INPARANOID

Zea mays

GRMZM2G139710_P01 Score: 1
GRMZM2G139710_P02 Score: 1

Oryza sativa subsp. japonica

LOC_Os01g59620.1 Score: 1

Sorghum bicolor

4753708 Score: 1

Zea mays

GRMZM2G139710_P01 Score: 1
GRMZM2G139710_P02 Score: 1

Zea mays

GRMZM2G060478_P01 Score: 1
GRMZM2G139710_P01 Score: 1
GRMZM2G139710_P02 Score: 1

Vitis vinifera

GSVIVP00023351001 Score: 1
GSVIVP00033960001 Score: 1

Expression data

Expressed Sequence Tags

At.11687
Arabidopsis thaliana SUVH3 (SU(VAR)3-9 HOMOLOG 3) (SUVH3) mRNA, complete cds /cds=p(212,2221) /gb=NM_105968
At.8375
Arabidopsis thaliana SUVH1 (SUVH1) mRNA, complete cds /cds=p(363,2375) /gb=AF344444
Hv.2567
Hordeum vulgare subsp. vulgare cDNA clone: FLbaf52h10, mRNA sequence /gb=AK249824
Hv.29295
AL506577 Hordeum vulgare Barke developing caryopsis (3.-15.DAP) Hordeum vulgare subsp. vulgare cDNA clone HY03J09T 5', mRNA sequence /clone=HY03J09 /clone_end=5' /gb=AL506577
Os.11922
Oryza sativa Japonica Group cDNA clone:J023004N15, full insert sequence /cds=p(280,2298) /gb=AK069035
Os.3123
Oryza sativa Japonica Group cDNA clone:001-026-A12, full insert sequence /gb=AK059336
Os.35901
Oryza sativa Japonica Group cDNA clone:J013002H03, full insert sequence /gb=AK065227
Os.97866
Oryza sativa Japonica Group cDNA clone:J033092A08, full insert sequence /cds=p(393,2834) /gb=AK102379
Vvi.14480
WIN1127.C21_D07 Muscat Hamburg pre-veraison berry normalized (WIN11) Vitis vinifera cDNA clone WIN1127_D07 3', mRNA sequence /clone=WIN1127_D07 /clone_end=3' /gb=EC986263

Domain Architecture

YDG_SRA PF02182 GRMZM2G139710_P01
DomainStartEndBit scoreE-value
YDG_SRA303458315.61e-91
Pre-SET4855851313.8e-36
SET587743164.23.8e-46

Sequences