version: 3.0
Gene model: GRMZM2G140411_P02
Identification
Genome Databases
Orthologs and co-orthologs (in-paralogs)
Look for sequence homologs using SIMAP@MIPS
SIMAPOrtholog identification by INPARANOID
Coccomyxa sp. C-169
101925 Score: 1Zea mays
GRMZM2G180654_P04 Score: 1.004GRMZM2G180654_P03 Score: 1
GRMZM2G180654_P01 Score: 0.992
GRMZM2G140411_P01 Score: 0.953
GRMZM2G140411_P02 Score: 0.953
GRMZM2G105807_P01 Score: 0.923
GRMZM2G105807_P02 Score: 0.923
Zea mays
GRMZM2G180654_P04 Score: 1GRMZM2G180654_P01 Score: 0.971
GRMZM2G140411_P01 Score: 0.93
GRMZM2G140411_P02 Score: 0.93
Oryza sativa subsp. japonica
LOC_Os06g41730.1 Score: 1LOC_Os06g41730.2 Score: 1
Physcomitrella patens
127582 Score: 1Zea mays
GRMZM2G180654_P04 Score: 1.006GRMZM2G180654_P03 Score: 1
GRMZM2G180654_P01 Score: 0.987
GRMZM2G140411_P01 Score: 0.919
GRMZM2G140411_P02 Score: 0.919
Populus trichocarpa
206867 Score: 1Zea mays
GRMZM2G180654_P04 Score: 1GRMZM2G180654_P01 Score: 0.987
GRMZM2G140411_P01 Score: 0.969
GRMZM2G140411_P02 Score: 0.969
GRMZM2G105807_P01 Score: 0.941
GRMZM2G105807_P02 Score: 0.941
Sorghum bicolor
5061941 Score: 1Zea mays
GRMZM2G140411_P01 Score: 1GRMZM2G140411_P02 Score: 1
Selaginella moellendorffii
271464 Score: 1Zea mays
GRMZM2G180654_P04 Score: 1.006GRMZM2G180654_P03 Score: 1
GRMZM2G180654_P01 Score: 0.987
GRMZM2G140411_P01 Score: 0.919
GRMZM2G140411_P02 Score: 0.919
Expression data
- NCBI EST Profile Viewer (UniGene: At.12107)
- NCBI EST Profile Viewer (UniGene: At.34646)
- NCBI EST Profile Viewer (UniGene: At.43690)
- NCBI EST Profile Viewer (UniGene: Hv.19293)
- NCBI EST Profile Viewer (UniGene: Hv.5829)
- NCBI EST Profile Viewer (UniGene: Mtr.2072)
- NCBI EST Profile Viewer (UniGene: Mtr.21903)
- NCBI EST Profile Viewer (UniGene: Os.12814)
- NCBI EST Profile Viewer (UniGene: Os.54897)
- NCBI EST Profile Viewer (UniGene: Pba.4335)
- NCBI EST Profile Viewer (UniGene: Ppa.226)
- NCBI EST Profile Viewer (UniGene: Ppa.443)
- NCBI EST Profile Viewer (UniGene: Pth.4335)
- NCBI EST Profile Viewer (UniGene: Ptp.3438)
- NCBI EST Profile Viewer (UniGene: Vvi.3347)
- NCBI EST Profile Viewer (UniGene: Vvi.4028)
Expressed Sequence Tags
- At.12107
- Arabidopsis thaliana mRNA for hypothetical protein, complete cds, clone: RAFL24-09-F03 /cds=p(181,2541) /gb=AK176382
- At.34646
- Arabidopsis thaliana ARID/BRIGHT DNA-binding domain-containing protein (AT1G76510) mRNA, complete cds /cds=p(230,1534) /gb=NM_106301
- At.43690
- Arabidopsis thaliana ARID/BRIGHT DNA-binding domain-containing protein (AT1G20910) mRNA, complete cds /cds=p(176,1372) /gb=NM_101944
- Hv.19293
- AV942153 K. Sato unpublished cDNA library, strain H602 adult, heading stage top three leaves Hordeum vulgare subsp. spontaneum cDNA clone bah39l11 5', mRNA sequence /clone=bah39l11 /clone_end=5' /gb=AV942153
- Hv.5829
- Hordeum vulgare subsp. vulgare cDNA clone: FLbaf46h03, mRNA sequence /gb=AK249562
- Mtr.2072
- s13dNF98D03MJ027_246106 Methyl Jasmonate-Elicited Root Cell Suspension Culture Medicago truncatula cDNA, mRNA sequence /gb=CX530035
- Mtr.21903
- MEUAB56TR JCVI-MT2 Medicago truncatula cDNA 3', mRNA sequence /clone_end=3' /gb=GE349415
- Os.12814
- Oryza sativa Japonica Group cDNA clone:J013170P10, full insert sequence /cds=p(442,1827) /gb=AK099075
- Os.54897
- Oryza sativa Japonica Group cDNA clone:002-121-B09, full insert sequence /gb=AK107036
- Pba.4335
- WS0253.B21_F24 PT-MB-N-A-15 Populus trichocarpa cDNA clone WS0253_F24 3', mRNA sequence /clone=WS0253_F24 /clone_end=3' /gb=CV243974
- Ppa.226
- Physcomitrella patens subsp. patens ARID/BRIGHT DNA-binding domain-containing protein (ARID1503) mRNA, partial cds /cds=p(1,897) /gb=XM_001770901
- Ppa.443
- Physcomitrella patens subsp. patens ARID/BRIGHT DNA-binding domain-containing protein (ARID1502) mRNA, complete cds /cds=p(1,987) /gb=XM_001764103
- Pth.4335
- WS0253.B21_F24 PT-MB-N-A-15 Populus trichocarpa cDNA clone WS0253_F24 3', mRNA sequence /clone=WS0253_F24 /clone_end=3' /gb=CV243974
- Ptp.3438
- T105G08 Populus apical shoot cDNA library Populus tremula x Populus tremuloides cDNA 5 prime, mRNA sequence /clone_end=5' /gb=BU837784
- Vvi.3347
- WIN0526.C21_E06 Cab Sauv flower, leaf and root normalized (WIN05) Vitis vinifera cDNA clone WIN0526_E06 3', mRNA sequence /clone=WIN0526_E06 /clone_end=3' /gb=EC942591
- Vvi.4028
- S2B24047 Buds (VvS2) Vitis vinifera cDNA clone S2B24047, mRNA sequence /clone=S2B24047 /gb=EE080310