Plant Transcription factor database - Universität Potsdam
version: 3.0

Gene model: GRMZM2G140524_P01

Identification

Species:
Zea mays
Gene model
GRMZM2G140524_P01
Family
Jumonji
3D structure (top 5)
2OX0 2W2I
PDB entry:

Genome Databases

Orthologs and co-orthologs (in-paralogs)

Look for sequence homologs using SIMAP@MIPS

SIMAP

INPARANOID could not detect any orthologs for this gene model

Expression data

Expressed Sequence Tags

At.26858
Arabidopsis thaliana transcription factor jumonji (jmj) family protein / zinc finger (C5HC2 type) family protein (AT1G08620) mRNA, complete cds /cds=p(1,3552) /gb=NM_100735
At.27326
Arabidopsis thaliana transcription factor jumonji (jmj) family protein / zinc finger (C5HC2 type) family protein (AT1G30810) mRNA, complete cds /cds=p(323,2686) /gb=NM_102818
At.43482
Arabidopsis thaliana transcription factor jumonji (jmj) family protein / zinc finger (C5HC2 type) family protein (AT4G20400) mRNA, complete cds /cds=p(201,3065) /gb=NM_118159
At.53035
Arabidopsis thaliana MEE27 (maternal effect embryo arrest 27); transcription factor (MEE27) mRNA, complete cds /cds=p(1,2421) /gb=NM_129041
Hv.16169
Hordeum vulgare subsp. vulgare cDNA clone: FLbaf124d14, mRNA sequence /gb=AK253132
Os.10868
Oryza sativa Japonica Group cDNA clone:J023127H13, full insert sequence /cds=p(200,3916) /gb=AK121381
Sbi.8331
RHOH1_36_H01.b3_A002 Acid- and alkaline-treated roots Sorghum bicolor cDNA clone RHOH1_36_H01_A002 3', mRNA sequence /clone=RHOH1_36_H01_A002 /clone_end=3' /gb=CN129603 /gi=45957447

Domain Architecture

JmjC PF02373 GRMZM2G140524_P01
DomainStartEndBit scoreE-value
JmjC1116221.42.3e-63
zf-C5HC222227594.53.7e-25
FYRN62968162.61.5e-15
FYRC684776983.2e-26

Sequences