Plant Transcription factor database - Universität Potsdam
version: 3.0

Gene model: GRMZM2G143328_P01

Identification

Species:
Zea mays
Gene model
GRMZM2G143328_P01
Family
MYB
3D structure (top 5)
1H89 1H8A 2K9N 1GV2 2JUH
PDB entry:

Genome Databases

Orthologs and co-orthologs (in-paralogs)

Look for sequence homologs using SIMAP@MIPS

SIMAP

Ortholog identification by INPARANOID

Arabidopsis lyrata

322901 Score: 1

Arabidopsis thaliana

AT3G27810.1 Score: 1

Carica papaya

evm.TU.supercontig_186.4 Score: 1

Oryza sativa subsp. japonica

LOC_Os01g45090.1 Score: 1

Expression data

Expressed Sequence Tags

At.226
Arabidopsis thaliana ATMYB21 (MYB DOMAIN PROTEIN 21); DNA binding / transcription factor (ATMYB21) mRNA, complete cds /cds=p(176,856) /gb=NM_113696
Mtr.18646
s13dNF45C02GS006_461126 Germinating Seed Medicago truncatula cDNA, mRNA sequence /gb=CX538934
Mtr.7346
NF091A12FL1F1088 Developing flower Medicago truncatula cDNA clone NF091A12FL 5', mRNA sequence /clone=NF091A12FL /clone_end=5' /gb=BI272897
Os.79224
Oryza sativa (japonica cultivar-group) Os01g0637800 (Os01g0637800) mRNA, complete cds /cds=p(1,687) /gb=NM_001050205
Os.86448
Oryza sativa (japonica cultivar-group) Os05g0568200 (Os05g0568200) mRNA, complete cds /cds=p(1,750) /gb=NM_001062891
Vvi.9027
WIN059.C21_C06 Cab Sauv flower, leaf and root normalized (WIN05) Vitis vinifera cDNA clone WIN059_C06 3', mRNA sequence /clone=WIN059_C06 /clone_end=3' /gb=EC939286

Domain Architecture

Myb_DNA-binding PF00249 GRMZM2G143328_P01
DomainStartEndBit scoreE-value
Myb_DNA-binding2269509.3e-12
Myb_DNA-binding7512039.31.6e-08

Sequences