Plant Transcription factor database - Universität Potsdam

version: 3.0

Gene model: GRMZM2G143788_P01

Identification

Species: Zea mays Gene model GRMZM2G143788_P01 Family SWI/SNF-BAF60b 3D structure (top 5) 1UHR 1V31 1V32 2Z5S
	PDB entry:

Genome Databases

MaizeSequence.org

Orthologs and co-orthologs (in-paralogs)

Look for sequence homologs using SIMAP@MIPS

Ortholog identification by INPARANOID

Oryza sativa subsp. japonica

LOC_Os12g32280.1 Score: 1

Physcomitrella patens

130616 Score: 1

Populus trichocarpa

813615 Score: 1

Sorghum bicolor

4113286 Score: 1

Selaginella moellendorffii

59520 Score: 1

Vitis vinifera

GSVIVP00007730001 Score: 1

Expression data

Expressed Sequence Tags

Hv.30829: EBpi07_SQ003_G23_R pistil, 12 DPA, no treatment, cv Optic, EBpi07 Hordeum vulgare subsp. vulgare cDNA clone EBpi07_SQ003_G23 5', mRNA sequence /clone=EBpi07_SQ003_G23 /clone_end=5' /gb=BQ760296
Os.38791: CI262497 Oryza sativa (japonica cultivar-group) Shoot and root of germinating seeds Oryza sativa (japonica cultivar-group) cDNA clone 046-M024R-G07 3', mRNA sequence /clone=046-M024R-G07 /clone_end=3' /gb=CI262497

Domain Architecture

GRMZM2G143788_P01

Domain	Start	End	Bit score	E-value
SWIB	65	142	132.4	1.4e-36

Sequences

protein sequence
transcript sequence