Plant Transcription factor database - Universität Potsdam
version: 3.0

Gene model: GRMZM2G143788_P01

Identification

Species:
Zea mays
Gene model
GRMZM2G143788_P01
Family
SWI/SNF-BAF60b
3D structure (top 5)
1UHR 1V31 1V32 2Z5S
PDB entry:

Genome Databases

Orthologs and co-orthologs (in-paralogs)

Look for sequence homologs using SIMAP@MIPS

SIMAP

Ortholog identification by INPARANOID

Oryza sativa subsp. japonica

LOC_Os12g32280.1 Score: 1

Physcomitrella patens

130616 Score: 1

Populus trichocarpa

813615 Score: 1

Sorghum bicolor

4113286 Score: 1

Selaginella moellendorffii

59520 Score: 1

Vitis vinifera

GSVIVP00007730001 Score: 1

Expression data

Expressed Sequence Tags

Hv.30829
EBpi07_SQ003_G23_R pistil, 12 DPA, no treatment, cv Optic, EBpi07 Hordeum vulgare subsp. vulgare cDNA clone EBpi07_SQ003_G23 5', mRNA sequence /clone=EBpi07_SQ003_G23 /clone_end=5' /gb=BQ760296
Os.38791
CI262497 Oryza sativa (japonica cultivar-group) Shoot and root of germinating seeds Oryza sativa (japonica cultivar-group) cDNA clone 046-M024R-G07 3', mRNA sequence /clone=046-M024R-G07 /clone_end=3' /gb=CI262497

Domain Architecture

SWIB PF02201 GRMZM2G143788_P01
DomainStartEndBit scoreE-value
SWIB65142132.41.4e-36

Sequences