Plant Transcription factor database - Universität Potsdam
version: 3.0

Gene model: GRMZM2G146047_P02

Identification

Species:
Zea mays
Gene model
GRMZM2G146047_P02
Family
C3H
3D structure (top 5)
1XTI 1CU1 1T6N 2DB3 3BER
PDB entry:

Genome Databases

Orthologs and co-orthologs (in-paralogs)

Look for sequence homologs using SIMAP@MIPS

SIMAP

Ortholog identification by INPARANOID

Arabidopsis lyrata

483950 Score: 1

Zea mays

GRMZM2G146047_P02 Score: 1
GRMZM2G146047_P01 Score: 0.94

Arabidopsis thaliana

AT2G47680.1 Score: 1

Zea mays

GRMZM2G146047_P02 Score: 1
GRMZM2G146047_P01 Score: 0.941

Carica papaya

evm.TU.supercontig_9.260 Score: 1

Zea mays

GRMZM2G146047_P01 Score: 1
GRMZM2G146047_P02 Score: 0.989

Oryza sativa subsp. japonica

LOC_Os01g15300.1 Score: 1
LOC_Os01g15300.2 Score: 0.914

Sorghum bicolor

143132 Score: 1

Selaginella moellendorffii

173103 Score: 1

Zea mays

GRMZM2G146047_P02 Score: 1
GRMZM2G146047_P01 Score: 0.955

Zea mays

GRMZM2G146047_P02 Score: 1
GRMZM2G146047_P01 Score: 0.938

Vitis vinifera

GSVIVP00027989001 Score: 1

Expression data

Expressed Sequence Tags

Hv.6919
AV836863 K. Sato unpublished cDNA library: Hordeum vulgare subsp. vulgare seedling leaves second leaf stage Hordeum vulgare subsp. vulgare cDNA clone basdi12, mRNA sequence /clone=basdi12 /gb=AV836863
Os.49825
Oryza sativa Japonica Group cDNA clone:J023078K23, full insert sequence /gb=AK100311
Pth.17511
Populus trichocarpa clone WS0128_O12 /gb=EF148229

Domain Architecture

Helicase_C PF00271 GRMZM2G146047_P02
DomainStartEndBit scoreE-value
Helicase_C29038338.62.4e-08
zf-CCCH72474924.60.00042
zf-CCCH75177716.80.0091

Sequences