Plant Transcription factor database - Universität Potsdam
version: 3.0

Gene model: GRMZM2G147346_P01

Identification

Species:
Zea mays
Gene model
GRMZM2G147346_P01
Family
MYB
3D structure (top 5)
1H89 1H8A 2K9N 1GV2 2JUH
PDB entry:

Genome Databases

Orthologs and co-orthologs (in-paralogs)

Look for sequence homologs using SIMAP@MIPS

SIMAP

Ortholog identification by INPARANOID

Oryza sativa subsp. japonica

LOC_Os10g33810.1 Score: 1

Sorghum bicolor

5048747 Score: 1

Expression data

Expressed Sequence Tags

At.10915
Arabidopsis thaliana AtMYB63 (myb domain protein 63); DNA binding / transcription factor (AtMYB63) mRNA, complete cds /cds=p(15,899) /gb=NM_106569
At.11321
Arabidopsis thaliana clone 152630 mRNA, complete sequence /cds=p(163,981) /gb=AY085461
At.5349
Arabidopsis thaliana MYB7 (myb domain protein 7); DNA binding / transcription factor (MYB7) mRNA, complete cds /cds=p(31,840) /gb=NM_127224
At.974
Arabidopsis thaliana AtMYB17 (myb domain protein 17); DNA binding / transcription factor (AtMYB17) mRNA, complete cds /cds=p(305,1204) /gb=NM_115989
Hv.21121
H.vulgare myb2 mRNA /cds=p(44,799) /gb=X70876
Hv.27175
Hordeum vulgare subsp. vulgare cDNA clone: FLbaf178a22, mRNA sequence /gb=AK248649
Hv.4463
HC114B11_SK.ab1 HC Hordeum vulgare subsp. vulgare cDNA clone HC114B11_SK.ab1 similar to myb protein homolog - rice gi|1946265|emb|CAA72217.1| (Y11414) myb [Oryza sativa], mRNA sequence /clone=HC114B11_SK.ab1 /gb=BM816803
Mtr.18532
NF063H10EC1F1091 Elicited cell culture Medicago truncatula cDNA clone NF063H10EC 5', mRNA sequence /clone=NF063H10EC /clone_end=5' /gb=BF644340
Mtr.4790
EST1227002 MTY Medicago truncatula cDNA clone MTYB151, mRNA sequence /clone=MTYB151 /gb=DW018041
Os.10172
CT857440 Oryza sativa (indica cultivar-group) cv. Guang Lu Ai 4 Oryza sativa (indica cultivar-group) cDNA clone OSIGCRN106M14, mRNA sequence /clone=OSIGCRN106M14 /gb=CT857440
Os.3387
Oryza sativa (indica cultivar-group) cDNA clone:OSIGCRA107G14, full insert sequence /gb=CT834744
Os.47854
Oryza sativa Japonica Group cDNA clone:J023030I19, full insert sequence /gb=AK111720
Os.84391
Oryza sativa Japonica Group cDNA clone:001-031-D02, full insert sequence /gb=AK111960
Sbi.3364
WOUND1_65_D11.g1_A002 Wounded leaves Sorghum bicolor cDNA clone WOUND1_65_D11_A002 5', mRNA sequence /clone=WOUND1_65_D11_A002 /clone_end=5' /gb=CN149909 /gi=45991895

Domain Architecture

Myb_DNA-binding PF00249 GRMZM2G147346_P01
DomainStartEndBit scoreE-value
Myb_DNA-binding146153.58.1e-13
Myb_DNA-binding6711242.51.6e-09

Sequences