Plant Transcription factor database - Universität Potsdam
version: 3.0

Gene model: GRMZM2G147698_P01

Identification

Species:
Zea mays
Gene model
GRMZM2G147698_P01
Family
MYB
3D structure (top 5)
1H8A 2K9N 1GV2 1H89 2JUH
PDB entry:

Genome Databases

Orthologs and co-orthologs (in-paralogs)

Look for sequence homologs using SIMAP@MIPS

SIMAP

Ortholog identification by INPARANOID

Zea mays

GRMZM2G147698_P01 Score: 1
GRMZM2G159069_P01 Score: 1

Oryza sativa subsp. japonica

LOC_Os03g25550.1 Score: 1

Expression data

Expressed Sequence Tags

At.10907
Arabidopsis thaliana AtMYB50 (myb domain protein 50); DNA binding / transcription factor (AtMYB50) mRNA, complete cds /cds=p(24,968) /gb=NM_104552
At.10913
Arabidopsis thaliana putative transcription factor (At1g09540) mRNA, complete cds /cds=p(173,1273) /gb=AY063939
At.227
Arabidopsis thaliana ATMYB4 (myb domain protein 4); transcription repressor (ATMYB4) mRNA, complete cds /cds=p(131,1189) /gb=NM_180548
At.3837
Arabidopsis thaliana MYB55 (myb domain protein 55); DNA binding / transcription factor (MYB55) mRNA, complete cds /cds=p(165,1175) /gb=NM_116398
At.5673
Arabidopsis thaliana AT3g12720/MBK21_8 mRNA, complete cds /cds=p(88,1011) /gb=AY039554
Hv.16027
HV_CEa0002G15f Hordeum vulgare seedling green leaf EST library HVcDNA0004 (Blumeria challenged) Hordeum vulgare subsp. vulgare cDNA clone HV_CEa0002G15f, mRNA sequence /clone=HV_CEa0002G15f /gb=BF261857
Hv.168
H.vulgare myb3 mRNA /cds=p(65,973) /gb=X70878
Hv.6949
Hordeum vulgare subsp. vulgare cDNA clone: FLbaf88d11, mRNA sequence /gb=AK250733
Mtr.15761
Medicago truncatula clone MTYFL_FM_FN_FO1G-C-4 unknown mRNA /cds=p(49,1134) /gb=BT052924
Mtr.16033
EST5313075 GESD Medicago truncatula cDNA clone pGESD10F11 5' end, mRNA sequence /clone=pGESD10F11 /clone_end=5' /gb=BI311325
Mtr.17488
NF028E10ST1F1000 Developing stem Medicago truncatula cDNA clone NF028E10ST 5', mRNA sequence /clone=NF028E10ST /clone_end=5' /gb=AW690117
Mtr.19352
Medicago truncatula clone MTYFL_FM_FN_FO1G-P-4 unknown mRNA /cds=m(263,1366) /gb=BT052849
Os.45892
Oryza sativa Japonica Group cDNA clone:J023084H22, full insert sequence /cds=p(281,1186) /gb=AK111782
Os.48608
Oryza sativa (indica cultivar-group) cDNA clone:OSIGCSN047M16, full insert sequence /gb=CT837789
Os.78946
Oryza sativa (japonica cultivar-group) Os07g0497500 (Os07g0497500) mRNA, complete cds /cds=p(1,1203) /gb=NM_001066243
Os.80488
Oryza sativa (japonica cultivar-group) Os08g0486300 (Os08g0486300) mRNA, complete cds /cds=p(1,1074) /gb=NM_001068630
Os.9514
Oryza sativa Japonica Group cDNA clone:J023018J24, full insert sequence /cds=p(1926,3209) /gb=AK111821
Sbi.12634
OX1_24_B03.g1_A002 Oxidatively-stressed leaves and roots Sorghum bicolor cDNA clone OX1_24_B03_A002 5', mRNA sequence /clone=OX1_24_B03_A002 /clone_end=5' /gb=CN139844 /gi=45975410
Sbi.15586
GABR1_29_H12.g1_A002 GA- or brassinolide-treated seedlings Sorghum bicolor cDNA clone GABR1_29_H12_A002 5', mRNA sequence /clone=GABR1_29_H12_A002 /clone_end=5' /gb=CX616786 /gi=57815573
Sbi.2589
ANR1_9_D06.g1_A002 Anaerobic roots Sorghum bicolor cDNA clone ANR1_9_D06_A002 5', mRNA sequence /clone=ANR1_9_D06_A002 /clone_end=5' /gb=CX608930 /gi=57807650

Domain Architecture

Myb_DNA-binding PF00249 GRMZM2G147698_P01
DomainStartEndBit scoreE-value
Myb_DNA-binding146152.12.1e-12
Myb_DNA-binding6711251.63e-12

Sequences