Plant Transcription factor database - Universität Potsdam
version: 3.0

Gene model: GRMZM2G149153_P01

Identification

Species:
Zea mays
Gene model
GRMZM2G149153_P01
Family
SET
3D structure (top 5)
3H6L 1ML9 2R3A 2W5Y 3BO5
PDB entry:

Genome Databases

Orthologs and co-orthologs (in-paralogs)

Look for sequence homologs using SIMAP@MIPS

SIMAP

Ortholog identification by INPARANOID

Arabidopsis lyrata

493373 Score: 1

Arabidopsis thaliana

AT4G15180.1 Score: 1

Carica papaya

evm.TU.supercontig_8.248 Score: 1

Populus trichocarpa

594422 Score: 1

Sorghum bicolor

4763578 Score: 1

Selaginella moellendorffii

447947 Score: 1

Vitis vinifera

GSVIVP00026090001 Score: 1

Expression data

Expressed Sequence Tags

Mtr.8961
AJ498907 MTPOSE Medicago truncatula cDNA clone mt--acc955210a04, mRNA sequence /clone=mt--acc955210a04 /gb=AJ498907
Os.18478
Oryza sativa Japonica Group cDNA clone:J023150L05, full insert sequence /gb=AK121489
Os.53354
Oryza sativa Japonica Group cDNA clone:J013168G19, full insert sequence /gb=AK072227
Ppa.20013
Physcomitrella patens subsp. patens predicted protein (SDG1515) mRNA, complete cds /cds=p(1,8559) /gb=XM_001770195
Ptp.2260
C038P76.5pR Populus strain T89 leaves Populus tremula x Populus tremuloides cDNA clone C038P76 5', mRNA sequence /clone=C038P76 /clone_end=5' /gb=CK100499
Sbi.19120
HS1_17_A03.g1_A012 Heat-shocked seedlings Sorghum bicolor cDNA clone HS1_17_A03_A012 5', mRNA sequence /clone=HS1_17_A03_A012 /clone_end=5' /gb=CD213003 /gi=30950653
Vvi.18337
VVG038F01_758613 CabSau Cell Culture (CELu0001) Vitis vinifera cDNA clone VVG038F01 5, mRNA sequence /clone=VVG038F01 /clone_end=5' /gb=DT006849

Domain Architecture

F-box PF00646 GRMZM2G149153_P01
DomainStartEndBit scoreE-value
F-box10971146150.23
SET1696185963.39.1e-16

Sequences