Plant Transcription factor database - Universität Potsdam
version: 3.0

Gene model: GRMZM2G149157_P01

Identification

Species:
Zea mays
Gene model
GRMZM2G149157_P01
Family
SNF2
3D structure (top 5)
1Z63 3DMQ 1Z3I 1WP9 2FWR
PDB entry:

Genome Databases

Orthologs and co-orthologs (in-paralogs)

Look for sequence homologs using SIMAP@MIPS

SIMAP

Ortholog identification by INPARANOID

Zea mays

GRMZM2G149157_P01 Score: 1
GRMZM2G149157_P02 Score: 1

Oryza sativa subsp. japonica

LOC_Os08g08220.1 Score: 1
LOC_Os08g08220.2 Score: 1
LOC_Os08g08220.3 Score: 1

Expression data

Expressed Sequence Tags

At.15795
Arabidopsis thaliana putative DNA-binding protein (At1g50410) mRNA, complete cds /cds=p(190,3135) /gb=AY039939
Hv.30732
HB01E03r BC Hordeum vulgare subsp. vulgare cDNA clone HB01E03 5-PRIME, mRNA sequence /clone=HB01E03 /clone_end=5' /gb=BQ472867
Os.17162
Oryza sativa Japonica Group cDNA clone:J013119B08, full insert sequence /gb=AK072085
Os.33780
Oryza sativa Japonica Group cDNA clone:J023054E15, full insert sequence /gb=AK070470
Sbi.2299
HS1_24_A10.b1_A012 Heat-shocked seedlings Sorghum bicolor cDNA clone HS1_24_A10_A012 3', mRNA sequence /clone=HS1_24_A10_A012 /clone_end=3' /gb=CD206664 /gi=30937956

Domain Architecture

SNF2_N PF00176 GRMZM2G149157_P01
DomainStartEndBit scoreE-value
SNF2_N293720188.51.8e-53

Sequences