Plant Transcription factor database - Universität Potsdam
version: 3.0

Gene model: GRMZM2G157060_P01

Identification

Species:
Zea mays
Gene model
GRMZM2G157060_P01
Family
MYB-related
3D structure (top 5)
1IRZ 1OFC 2ELK 2CRG 2CU7
PDB entry:

Genome Databases

Orthologs and co-orthologs (in-paralogs)

Look for sequence homologs using SIMAP@MIPS

SIMAP

Ortholog identification by INPARANOID

Coccomyxa sp. C-169

70912 Score: 1

Zea mays

GRMZM2G149958_P01 Score: 1
GRMZM2G157060_P01 Score: 1
GRMZM2G002238_P01 Score: 0.979
GRMZM2G068592_P01 Score: 0.979

Expression data

Expressed Sequence Tags

Hv.9331
BNEL122c5 Barley EST endosperm library Hordeum vulgare subsp. vulgare cDNA clone BNEL122c5 5' similar to Oryza sativa, mRNA sequence /clone=BNEL122c5 /clone_end=5' /gb=CV055679
Os.15338
Oryza sativa (japonica cultivar-group) transcription factor MYBS1 mRNA, complete cds /cds=p(20,940) /gb=AY151042
Os.15556
Oryza sativa Japonica Group cDNA clone:001-208-B07, full insert sequence /gb=AK106166
Pba.1963
WS0231.B21_D04 PT-MB-A-13 Populus trichocarpa cDNA clone WS0231_D04 3', mRNA sequence /clone=WS0231_D04 /clone_end=3' /gb=CV239058
Pth.1963
WS0231.B21_D04 PT-MB-A-13 Populus trichocarpa cDNA clone WS0231_D04 3', mRNA sequence /clone=WS0231_D04 /clone_end=3' /gb=CV239058
Sbi.14152
DG1_123_F11.b1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA sequence /gb=BE356185
Vvi.10013
WIN0520.C21_A24 Cab Sauv flower, leaf and root normalized (WIN05) Vitis vinifera cDNA clone WIN0520_A24 3', mRNA sequence /clone=WIN0520_A24 /clone_end=3' /gb=EC940561

Domain Architecture

Myb_DNA-binding PF00249 GRMZM2G157060_P01
DomainStartEndBit scoreE-value
Myb_DNA-binding13818541.14.2e-09

Sequences