Plant Transcription factor database - Universität Potsdam
version: 3.0

Gene model: GRMZM2G157927_P02

Identification

Species:
Zea mays
Gene model
GRMZM2G157927_P02
Family
C3H
3D structure (top 5)
1M9O 2E5S 2RPP 2CQE 3D2Q
PDB entry:

Genome Databases

Orthologs and co-orthologs (in-paralogs)

Look for sequence homologs using SIMAP@MIPS

SIMAP

Ortholog identification by INPARANOID

Arabidopsis lyrata

475777 Score: 1

Zea mays

GRMZM2G157927_P01 Score: 1
GRMZM2G157927_P02 Score: 0.984

Arabidopsis thaliana

AT1G66810.1 Score: 1

Zea mays

GRMZM2G157927_P01 Score: 1
GRMZM2G157927_P02 Score: 1

Carica papaya

evm.TU.supercontig_170.23 Score: 1

Zea mays

GRMZM2G157927_P01 Score: 1
GRMZM2G157927_P02 Score: 0.984

Zea mays

GRMZM2G157927_P02 Score: 1
GRMZM2G157927_P01 Score: 0.966

Oryza sativa subsp. japonica

LOC_Os01g45730.1 Score: 1

Zea mays

GRMZM2G157927_P02 Score: 1
GRMZM2G157927_P01 Score: 0.973

Zea mays

GRMZM2G157927_P02 Score: 1
GRMZM2G157927_P01 Score: 0.98

Vitis vinifera

GSVIVP00030418001 Score: 1

Expression data

Expressed Sequence Tags

Os.30567
Oryza sativa Japonica Group cDNA clone:002-148-E11, full insert sequence /gb=AK108658
Os.54644
Oryza sativa Japonica Group cDNA clone:002-102-A03, full insert sequence /cds=p(160,1191) /gb=AK106354
Pba.2501
WS01914.B21_C20 PT-DX-N-A-10 Populus trichocarpa cDNA clone WS01914_C20 3', mRNA sequence /clone=WS01914_C20 /clone_end=3' /gb=CV229704
Pth.2501
WS01914.B21_C20 PT-DX-N-A-10 Populus trichocarpa cDNA clone WS01914_C20 3', mRNA sequence /clone=WS01914_C20 /clone_end=3' /gb=CV229704

Domain Architecture

zf-CCCH PF00642 GRMZM2G157927_P02
DomainStartEndBit scoreE-value
zf-CCCH27730353.21e-12
zf-CCCH31534123.30.00099

Sequences