Plant Transcription factor database - Universität Potsdam
version: 3.0

Gene model: GRMZM2G161961_P01

Identification

Species:
Zea mays
Gene model
GRMZM2G161961_P01
Family
HB
3D structure (top 5)
2DMN 1B72 1PUF 1DU6 1LE8
PDB entry:

Genome Databases

Orthologs and co-orthologs (in-paralogs)

Look for sequence homologs using SIMAP@MIPS

SIMAP

Ortholog identification by INPARANOID

Arabidopsis lyrata

493837 Score: 1

Zea mays

GRMZM2G013617_P01 Score: 1
GRMZM2G161961_P01 Score: 1

Arabidopsis thaliana

AT5G41410.1 Score: 1

Zea mays

GRMZM2G013617_P01 Score: 1
GRMZM2G161961_P01 Score: 1

Zea mays

GRMZM2G013617_P01 Score: 1
GRMZM2G161961_P01 Score: 1

Oryza sativa subsp. japonica

LOC_Os06g01934.1 Score: 1

Zea mays

GRMZM2G013617_P01 Score: 1
GRMZM2G161961_P01 Score: 1

Sorghum bicolor

4769352 Score: 1

Zea mays

GRMZM2G013617_P01 Score: 1
GRMZM2G161961_P01 Score: 1

Zea mays

GRMZM2G013617_P01 Score: 1
GRMZM2G161961_P01 Score: 1

Vitis vinifera

GSVIVP00014547001 Score: 1

Expression data

Expressed Sequence Tags

At.12624
Arabidopsis thaliana BLH4 (SAWTOOTH 2); DNA binding / transcription factor (BLH4) mRNA, complete cds /cds=p(261,2144) /gb=NM_179713
At.14305
Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH89ZE03 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) /gb=BX820985
At.48946
Arabidopsis thaliana AT4g36870/C7A10_490 mRNA, complete cds /cds=p(853,3072) /gb=AY050459
Hv.12894
HVSMEg0016O14f Hordeum vulgare pre-anthesis spike EST library HVcDNA0008 (white to yellow anther) Hordeum vulgare subsp. vulgare cDNA clone HVSMEg0016O14f, mRNA sequence /clone=HVSMEg0016O14f /gb=BG344928
Mtr.13534
NF004E06ST1F1000 Developing stem Medicago truncatula cDNA clone NF004E06ST 5', mRNA sequence /clone=NF004E06ST /clone_end=5' /gb=AW688195
Mtr.7013
AC4843 NOLLY Medicago truncatula cDNA 5', mRNA sequence /clone_end=5' /gb=DY618467
Os.17301
Oryza sativa Japonica Group cDNA clone:J013134A07, full insert sequence /cds=p(231,1991) /gb=AK068029
Os.27062
Oryza sativa Japonica Group cDNA, clone: J043023B19, full insert sequence /gb=AK287476
Os.50442
Oryza sativa Japonica Group cDNA clone:J023088C15, full insert sequence /gb=AK121207
Sbi.1439
WOUND1_26_C01.g1_A002 Wounded leaves Sorghum bicolor cDNA clone WOUND1_26_C01_A002 5', mRNA sequence /clone=WOUND1_26_C01_A002 /clone_end=5' /gb=CN145056 /gi=45983936
Sbi.8687
GABR1_65_A02.b1_A002 GA- or brassinolide-treated seedlings Sorghum bicolor cDNA clone GABR1_65_A02_A002 3', mRNA sequence /clone=GABR1_65_A02_A002 /clone_end=3' /gb=CX622606 /gi=57821393

Domain Architecture

POX PF07526 GRMZM2G161961_P01
DomainStartEndBit scoreE-value
POX124260209.87.2e-60
Homeobox3163743.30.0057

Sequences