Plant Transcription factor database - Universität Potsdam
version: 3.0

Gene model: GRMZM2G162481_P02

Identification

Species:
Zea mays
Gene model
GRMZM2G162481_P02
Family
HB
3D structure (top 5)
2CUF 2DA6 2HI3 1LFB 2DA4
PDB entry:

Genome Databases

Orthologs and co-orthologs (in-paralogs)

Look for sequence homologs using SIMAP@MIPS

SIMAP

Ortholog identification by INPARANOID

Arabidopsis thaliana

AT3G03660.1 Score: 1
AT3G03660.2 Score: 1

Zea mays

GRMZM2G022492_P01 Score: 1
GRMZM2G067003_P01 Score: 1
GRMZM2G162481_P01 Score: 1
GRMZM2G067003_P02 Score: 0.998
GRMZM2G162481_P02 Score: 0.998

Carica papaya

evm.TU.supercontig_73.3 Score: 1

Zea mays

GRMZM2G067003_P02 Score: 1
GRMZM2G162481_P02 Score: 1

Zea mays

GRMZM2G016800_P01 Score: 1
GRMZM2G067003_P02 Score: 1
GRMZM2G162481_P02 Score: 1
GRMZM2G016800_P02 Score: 0.97

Oryza sativa subsp. japonica

LOC_Os03g20910.1 Score: 1
LOC_Os03g20910.2 Score: 1

Populus trichocarpa

571283 Score: 1
571284 Score: 1
809560 Score: 1

Zea mays

GRMZM2G016800_P02 Score: 1
GRMZM2G067003_P02 Score: 1
GRMZM2G162481_P02 Score: 1

Sorghum bicolor

5030003 Score: 1

Zea mays

GRMZM2G067003_P02 Score: 1
GRMZM2G162481_P02 Score: 1

Expression data

Expressed Sequence Tags

Os.51648
Oryza sativa Japonica Group cDNA clone:001-113-A08, full insert sequence /gb=AK063262
Os.51714
Oryza sativa Japonica Group cDNA clone:J033021B15, full insert sequence /cds=p(106,894) /gb=AK073232

Domain Architecture

Homeobox PF00046 GRMZM2G162481_P02
DomainStartEndBit scoreE-value
Homeobox11817946.97.6e-11
Ribosomal_L32p1712210.90.12

Sequences