Plant Transcription factor database - Universität Potsdam
version: 3.0

Gene model: GRMZM2G162695_P01

Identification

Species:
Zea mays
Gene model
GRMZM2G162695_P01
Family
MYB
3D structure (top 5)
1H89 1H8A 2K9N 1GV2 2JUH
PDB entry:

Genome Databases

Orthologs and co-orthologs (in-paralogs)

Look for sequence homologs using SIMAP@MIPS

SIMAP

INPARANOID could not detect any orthologs for this gene model

Expression data

Expressed Sequence Tags

At.10920
Arabidopsis thaliana AtMYB74 (myb domain protein 74); DNA binding / transcription factor (AtMYB74) mRNA, complete cds /cds=p(104,1078) /gb=NM_116749
At.2261
Arabidopsis thaliana ATM4/ATMYB102 (ARABIDOPSIS MYB-LIKE 102); DNA binding / transcription factor (ATM4/ATMYB102) mRNA, complete cds /cds=p(109,1161) /gb=NM_118264
At.2669
Arabidopsis thaliana AtMYB41 (myb domain protein 41); DNA binding / transcription factor (AtMYB41) mRNA, complete cds /cds=p(1,849) /gb=NM_118951
At.28679
Arabidopsis thaliana AtMYB32 (myb domain protein 32); DNA binding / transcription factor (AtMYB32) mRNA, complete cds /cds=p(79,903) /gb=NM_119665
At.50533
Arabidopsis thaliana ATMYB103/ATMYB80/MS188/MYB103 (MYB DOMAIN PROTEIN 80); DNA binding / transcription factor (ATMYB103/ATMYB80/MS188/MYB103) mRNA, complete cds /cds=p(1,963) /gb=NM_124993
At.5394
Arabidopsis thaliana AtMIXTA/AtMYB16 (myb domain protein 16); DNA binding / transcription factor (AtMIXTA/AtMYB16) mRNA, complete cds /cds=p(224,1204) /gb=NM_121535
At.69663
Arabidopsis thaliana MYB106 (myb domain protein 106); DNA binding / transcription factor (MYB106) mRNA, complete cds /cds=p(154,1320) /gb=NM_110979
At.9932
Arabidopsis thaliana AtMYB9 (myb domain protein 9); DNA binding (AtMYB9) mRNA, complete cds /cds=p(326,1336) /gb=NM_203063
Hv.21121
H.vulgare myb2 mRNA /cds=p(44,799) /gb=X70876
Mtr.19694
EST1224335 MTY Medicago truncatula cDNA clone MTYA430, mRNA sequence /clone=MTYA430 /gb=DW015374
Os.21636
Oryza sativa Japonica Group cDNA clone:J023049M10, full insert sequence /gb=AK121023
Os.3390
O.sativa mRNA for myb factor, 1355 bp /cds=p(116,1222) /gb=Y11415
Os.58166
Oryza sativa (japonica cultivar-group) Os04g0470600 (Os04g0470600) mRNA, complete cds /cds=p(1,1119) /gb=NM_001059587
Os.80847
Oryza sativa Japonica Group cDNA, clone: J090031E07, full insert sequence /gb=AK288415
Os.83361
Oryza sativa (japonica cultivar-group) Os02g0579300 (Os02g0579300) mRNA, complete cds /cds=p(1,1029) /gb=NM_001053764
Pth.12469
UM45TE12.5pR Populus female catkins cDNA library Populus trichocarpa cDNA clone UM45TE12 5', mRNA sequence /clone=UM45TE12 /clone_end=5' /gb=DN500996

Domain Architecture

Myb_DNA-binding PF00249 GRMZM2G162695_P01
DomainStartEndBit scoreE-value
Myb_DNA-binding146149.31.5e-11
Myb_DNA-binding6711242.91.2e-09

Sequences