Plant Transcription factor database - Universität Potsdam
version: 3.0

Gene model: GRMZM2G164566_P01

Identification

Species:
Zea mays
Gene model
GRMZM2G164566_P01
Family
MYB
3D structure (top 5)
1H89 1H8A 2K9N 1GV2 2JUH
PDB entry:

Genome Databases

Orthologs and co-orthologs (in-paralogs)

Look for sequence homologs using SIMAP@MIPS

SIMAP

Ortholog identification by INPARANOID

Zea mays

GRMZM2G011422_P01 Score: 1
GRMZM2G164566_P01 Score: 1

Oryza sativa subsp. japonica

LOC_Os08g15020.1 Score: 1

Sorghum bicolor

4838500 Score: 1

Zea mays

GRMZM2G011422_P01 Score: 1
GRMZM2G164566_P01 Score: 1

Expression data

Expressed Sequence Tags

At.10912
Arabidopsis thaliana MYB60 (myb domain protein 60); DNA binding / transcription factor (MYB60) mRNA, complete cds /cds=p(67,909) /gb=NM_100755
At.10916
Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH59ZH02 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) /gb=BX832216
At.10923
Arabidopsis thaliana AtMYB87/MYB87 (myb domain protein 87); DNA binding / transcription factor (AtMYB87/MYB87) mRNA, complete cds /cds=p(32,949) /gb=NM_119940
At.69663
Arabidopsis thaliana MYB106 (myb domain protein 106); DNA binding / transcription factor (MYB106) mRNA, complete cds /cds=p(154,1320) /gb=NM_110979
At.742
Arabidopsis thaliana ATMYB84/MYB84/RAX3 (myb domain protein 84); DNA binding / transcription factor (ATMYB84/MYB84/RAX3) mRNA, complete cds /cds=p(207,1139) /gb=NM_114829
Hv.16001
BY845871 Seminal root Hordeum vulgare subsp. vulgare cDNA clone bart25d09 5', mRNA sequence /clone=bart25d09 /clone_end=5' /gb=BY845871
Mtr.11094
MEUBI94TF JCVI-MT2 Medicago truncatula cDNA 5', mRNA sequence /clone_end=5' /gb=GE348484
Mtr.1728
EST647911 HOGA Medicago truncatula cDNA clone HOGA-33L19, mRNA sequence /clone=HOGA-33L19 /gb=CB895119
Mtr.8106
AC4591 NOLLY Medicago truncatula cDNA 5', mRNA sequence /clone_end=5' /gb=DY618275
Os.10204
Oryza sativa Japonica Group cDNA clone:002-155-D04, full insert sequence /gb=AK109125
Os.49824
Oryza sativa Japonica Group cDNA clone:J023093J22, full insert sequence /cds=p(122,1072) /gb=AK111788
Os.55636
Oryza sativa Japonica Group cDNA clone:002-143-C10, full insert sequence /gb=AK108452
Os.58166
Oryza sativa (japonica cultivar-group) Os04g0470600 (Os04g0470600) mRNA, complete cds /cds=p(1,1119) /gb=NM_001059587
Os.76732
Oryza sativa Japonica Group cDNA, clone: J065154C10, full insert sequence /cds=p(109,1005) /gb=AK241370
Os.79998
Oryza sativa (japonica cultivar-group) Os02g0786300 (Os02g0786300) mRNA, complete cds /cds=p(1,1692) /gb=NM_001054869
Os.88582
Oryza sativa Japonica Group cDNA clone:006-308-C02, full insert sequence /cds=p(103,1068) /gb=AK112018
Os.91599
OD101C05 OD Oryza sativa cDNA 5' similar to myb - related protein (transcription factor), mRNA sequence /clone_end=5' /gb=BE040062
Ptp.3869
R007C04.5pR Populus root cDNA library Populus tremula x Populus tremuloides cDNA clone R007C04 5', mRNA sequence /clone=R007C04 /clone_end=5' /gb=DN497506

Domain Architecture

Myb_DNA-binding PF00249 GRMZM2G164566_P01
DomainStartEndBit scoreE-value
Myb_DNA-binding146245.61.9e-10
Myb_DNA-binding6811334.25.4e-07

Sequences