Plant Transcription factor database - Universität Potsdam
version: 3.0

Gene model: GRMZM2G164669_P01

Identification

Species:
Zea mays
Gene model
GRMZM2G164669_P01
Family
TRAF
3D structure (top 5)
3B84 2VKP 3FKC 2VPK 3GA1
PDB entry:

Genome Databases

Orthologs and co-orthologs (in-paralogs)

Look for sequence homologs using SIMAP@MIPS

SIMAP

Ortholog identification by INPARANOID

Arabidopsis lyrata

480104 Score: 1

Arabidopsis thaliana

AT2G04740.1 Score: 1

Cyanidioschyzon merolae

CMP151C Score: 1

Carica papaya

evm.TU.supercontig_132.80 Score: 1

Coccomyxa sp. C-169

70480 Score: 1

Oryza sativa subsp. japonica

LOC_Os06g21330.1 Score: 1

Physcomitrella patens

165660 Score: 1

Populus trichocarpa

246937 Score: 1

Sorghum bicolor

4770542 Score: 1

Selaginella moellendorffii

82941 Score: 1

Vitis vinifera

GSVIVP00025867001 Score: 1

Expression data

Expressed Sequence Tags

At.50071
Arabidopsis thaliana ankyrin repeat family protein (AT2G04740) mRNA, complete cds /cds=p(17,1753) /gb=NM_126504
Hv.27787
HVSMEc0020P24f Hordeum vulgare seedling shoot EST library HVcDNA0003 (Etiolated and unstressed) Hordeum vulgare subsp. vulgare cDNA clone HVSMEc0020P24f, mRNA sequence /clone=HVSMEc0020P24f /gb=BF620841
Os.54837
Oryza sativa (japonica cultivar-group) Os06g0318200 (Os06g0318200) mRNA, complete cds /cds=p(81,1838) /gb=NM_001064036
Pba.8032
WS02529.BR_A05 PT-MB-N-A-15 Populus trichocarpa cDNA clone WS02529_A05 5', mRNA sequence /clone=WS02529_A05 /clone_end=5' /gb=DT480472
Ppa.1022
Physcomitrella patens subsp. patens predicted protein (PHYPADRAFT_165660) mRNA, complete cds /cds=p(393,2303) /gb=XM_001767351
Pth.8032
WS02529.BR_A05 PT-MB-N-A-15 Populus trichocarpa cDNA clone WS02529_A05 5', mRNA sequence /clone=WS02529_A05 /clone_end=5' /gb=DT480472
Sbi.2710
GABR1_12_D05.g1_A002 GA- or brassinolide-treated seedlings Sorghum bicolor cDNA clone GABR1_12_D05_A002 5', mRNA sequence /clone=GABR1_12_D05_A002 /clone_end=5' /gb=CX614197 /gi=57812917

Domain Architecture

Ank PF00023 GRMZM2G164669_P01
DomainStartEndBit scoreE-value
Ank34646.24.7
Ank659718.30.033
BTB17027831.33.9e-06
BTB33745569.71e-17

Sequences