Plant Transcription factor database - Universität Potsdam
version: 3.0

Gene model: GRMZM2G164909_P01

Identification

Species:
Zea mays
Gene model
GRMZM2G164909_P01
Family
HSF
3D structure (top 5)
1HKS 3HTS
PDB entry:

Genome Databases

Orthologs and co-orthologs (in-paralogs)

Look for sequence homologs using SIMAP@MIPS

SIMAP

Ortholog identification by INPARANOID

Arabidopsis lyrata

911518 Score: 1
919451 Score: 1

Zea mays

GRMZM2G098696_P01 Score: 1
GRMZM2G164909_P01 Score: 1
GRMZM2G098696_P02 Score: 0.981

Arabidopsis thaliana

AT4G11660.1 Score: 1
AT5G62020.1 Score: 1

Zea mays

GRMZM2G098696_P01 Score: 1
GRMZM2G164909_P01 Score: 1
GRMZM2G098696_P02 Score: 0.982

Carica papaya

evm.TU.supercontig_74.65 Score: 1

Populus trichocarpa

548499 Score: 1

Vitis vinifera

GSVIVP00001119001 Score: 1

Expression data

Expressed Sequence Tags

Hv.15777
Hordeum vulgare subsp. vulgare cDNA clone: FLbaf178m14, mRNA sequence /gb=AK248436
Mtr.10591
EST1225248 MTY Medicago truncatula cDNA clone MTYAF37, mRNA sequence /clone=MTYAF37 /gb=DW016287
Mtr.8663
Medicago truncatula clone MTYFL_FM_FN_FO1G-M-13 unknown mRNA /cds=p(142,1221) /gb=BT053195
Os.11941
Oryza sativa Japonica Group cDNA clone:002-108-F03, full insert sequence /gb=AK106545
Os.27716
Oryza sativa (japonica cultivar-group) Os08g0546800 (Os08g0546800) mRNA, complete cds /cds=p(6,1856) /gb=NM_001068958
Os.50642
Oryza sativa (japonica cultivar-group) heat shock factor RHSF1 mRNA, complete cds /cds=p(122,988) /gb=AY344483
Sbi.1889
HS1_4_A05.g1_A012 Heat-shocked seedlings Sorghum bicolor cDNA clone HS1_4_A05_A012 5', mRNA sequence /clone=HS1_4_A05_A012 /clone_end=5' /gb=CD204212 /gi=30933027

Domain Architecture

HSF_DNA-bind PF00447 GRMZM2G164909_P01
DomainStartEndBit scoreE-value
HSF_DNA-bind70273156.39.3e-44

Sequences