Plant Transcription factor database - Universität Potsdam
version: 3.0

Gene model: GRMZM2G169316_P01

Identification

Species:
Zea mays
Gene model
GRMZM2G169316_P01
Family
MYB
3D structure (top 5)
1H89 1H8A 2K9N 1GV2 2JUH
PDB entry:

Genome Databases

Orthologs and co-orthologs (in-paralogs)

Look for sequence homologs using SIMAP@MIPS

SIMAP

Ortholog identification by INPARANOID

Arabidopsis lyrata

486007 Score: 1

Arabidopsis thaliana

AT3G55730.1 Score: 1

Carica papaya

evm.TU.supercontig_56.63 Score: 1

Oryza sativa subsp. japonica

LOC_Os01g63160.1 Score: 1

Sorghum bicolor

5054025 Score: 1

Vitis vinifera

GSVIVP00021430001 Score: 1

Expression data

Expressed Sequence Tags

Mtr.2832
META684TF JCVI-MT3 Medicago truncatula cDNA 5', mRNA sequence /clone_end=5' /gb=EY474566
Os.30620
Oryza sativa Japonica Group cDNA clone:002-146-A03, full insert sequence /cds=p(43,1284) /gb=AK108582
Ppa.3385
BY947177 ppls full-length cDNA library Physcomitrella patens subsp. patens cDNA clone PPLS021P06 5', mRNA sequence /clone=PPLS021P06 /clone_end=5' /gb=BY947177
Pth.12278
V012F11.5pR Populus male catkins cDNA library Populus trichocarpa cDNA clone V012F11 5', mRNA sequence /clone=V012F11 /clone_end=5' /gb=DN501651
Sbi.1608
WOUND1_25_B02.g1_A002 Wounded leaves Sorghum bicolor cDNA clone WOUND1_25_B02_A002 5', mRNA sequence /clone=WOUND1_25_B02_A002 /clone_end=5' /gb=CN144878 /gi=45983672
Vvi.20351
WIN0511.C21.1_D17 Cab Sauv flower, leaf and root normalized (WIN05) Vitis vinifera cDNA clone WIN0511_D17 3', mRNA sequence /clone=WIN0511_D17 /clone_end=3' /gb=EC936039

Domain Architecture

Myb_DNA-binding PF00249 GRMZM2G169316_P01
DomainStartEndBit scoreE-value
Myb_DNA-binding9714355.81.6e-13
Myb_DNA-binding14919450.18.4e-12

Sequences