Plant Transcription factor database - Universität Potsdam
version: 3.0

Gene model: GRMZM2G170480_P01

Identification

Species:
Zea mays
Gene model
GRMZM2G170480_P01
Family
Sigma70-like
3D structure (top 5)
1SIG 1L0O 2A6H 1L9Z 1RP3
PDB entry:

Genome Databases

Orthologs and co-orthologs (in-paralogs)

Look for sequence homologs using SIMAP@MIPS

SIMAP

Ortholog identification by INPARANOID

Arabidopsis lyrata

866812 Score: 1

Zea mays

GRMZM2G170480_P02 Score: 1
GRMZM2G170480_P01 Score: 0.903

Arabidopsis thaliana

AT3G53920.1 Score: 1

Zea mays

GRMZM2G170480_P02 Score: 1
GRMZM2G170480_P01 Score: 0.903

Oryza sativa subsp. japonica

LOC_Os05g51150.1 Score: 1

Populus trichocarpa

819521 Score: 1

Zea mays

GRMZM2G170480_P01 Score: 1
GRMZM2G170480_P02 Score: 1

Sorghum bicolor

4896026 Score: 1

Zea mays

GRMZM2G170480_P02 Score: 1
GRMZM2G170480_P01 Score: 0.901

Vitis vinifera

GSVIVP00032140001 Score: 1

Expression data

Expressed Sequence Tags

Hv.31556
HVSMEm0013I03r2 Hordeum vulgare green seedling (Blumeria infected) cDNA library HVSMEm (HVcDNA0014)2 Hordeum vulgare subsp. vulgare cDNA clone HV__Ea0042M03f, mRNA sequence /clone=HV__Ea0042M03f /gb=GH226324
Os.21453
Oryza sativa (indica cultivar-group) cDNA clone:OSIGCRA123A21, full insert sequence /gb=CT829356

Domain Architecture

Sigma70_r2 PF04542 GRMZM2G170480_P01
DomainStartEndBit scoreE-value
Sigma70_r233640537.45.7e-08
Sigma70_r340949059.99.8e-15
Sigma70_r4503556708.8e-18

Sequences