version: 3.0
Gene model: GRMZM2G171588_P02
Identification
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Genome Databases
Orthologs and co-orthologs (in-paralogs)
Look for sequence homologs using SIMAP@MIPS
SIMAPOrtholog identification by INPARANOID
Arabidopsis lyrata
318665 Score: 1Zea mays
GRMZM2G171588_P01 Score: 1GRMZM2G171588_P02 Score: 0.93
Arabidopsis thaliana
AT3G19080.1 Score: 1Zea mays
GRMZM2G171588_P01 Score: 1GRMZM2G171588_P02 Score: 1
GRMZM2G124620_P01 Score: 0.901
Cyanidioschyzon merolae
CMM087C Score: 1Zea mays
GRMZM2G124620_P01 Score: 1GRMZM2G171588_P02 Score: 0.926
Chlorella sp. NC64A
49597 Score: 1Zea mays
GRMZM2G171588_P02 Score: 1GRMZM2G124620_P01 Score: 0.924
GRMZM2G171588_P01 Score: 0.921
Chlamydomonas reinhardtii
194816 Score: 1Zea mays
GRMZM2G124620_P01 Score: 1GRMZM2G171588_P02 Score: 0.912
Coccomyxa sp. C-169
82403 Score: 1Zea mays
GRMZM2G171588_P02 Score: 1GRMZM2G124620_P01 Score: 0.924
GRMZM2G171588_P01 Score: 0.921
Micromonas sp. RCC299
106177 Score: 1Zea mays
GRMZM2G124620_P01 Score: 1GRMZM2G171588_P02 Score: 1
GRMZM2G171588_P01 Score: 0.922
Populus trichocarpa
208461 Score: 1Sorghum bicolor
123164 Score: 1Zea mays
GRMZM2G124620_P01 Score: 1GRMZM2G171588_P02 Score: 1
Expression data
Expressed Sequence Tags
- At.53383
- Arabidopsis thaliana SWIB complex BAF60b domain-containing protein (AT3G19080) mRNA, complete cds /cds=p(1,1389) /gb=NM_112794
- Hv.19903
- Hordeum vulgare subsp. vulgare cDNA clone: FLbaf50c07, mRNA sequence /gb=AK249847
- Mtr.22867
- Medicago truncatula clone MTYFH_FI_FJ_FK1G-K-6 unknown mRNA /cds=p(129,1090) /gb=BT052803
- Pth.15668
- WS0123.B21_P17 PT-GT-FL-A-3 Populus trichocarpa cDNA clone WS0123_P17 3', mRNA sequence /clone=WS0123_P17 /clone_end=3' /gb=CV237747
- Sbi.17406
- OX1_27_H12.b1_A002 Oxidatively-stressed leaves and roots Sorghum bicolor cDNA clone OX1_27_H12_A002 3', mRNA sequence /clone=OX1_27_H12_A002 /clone_end=3' /gb=CN134611 /gi=45966272