Plant Transcription factor database - Universität Potsdam
version: 3.0

Gene model: GRMZM2G172427_P01

Identification

Species:
Zea mays
Gene model
GRMZM2G172427_P01
Family
SET
3D structure (top 5)
2R3A 2RFI 1ML9 3H6L 1MVH
PDB entry:

Genome Databases

Orthologs and co-orthologs (in-paralogs)

Look for sequence homologs using SIMAP@MIPS

SIMAP

Ortholog identification by INPARANOID

Arabidopsis lyrata

481235 Score: 1

Arabidopsis thaliana

AT2G23740.1 Score: 1

Carica papaya

evm.TU.supercontig_15.86 Score: 1

Populus trichocarpa

218972 Score: 1

Sorghum bicolor

4884239 Score: 1

Vitis vinifera

GSVIVP00025025001 Score: 1

Expression data

Expressed Sequence Tags

Hv.21694
AU252288 salt-stressed barley root cDNA Hordeum vulgare subsp. vulgare cDNA clone BR-S25 similar to putative SET-domain transcription regulator, mRNA sequence /clone=BR-S25 /gb=AU252288
Hv.30036
HVSMEi0020G03f Hordeum vulgare 20 DAP spike EST library HVcDNA0010 (20 DAP) Hordeum vulgare subsp. vulgare cDNA clone HVSMEi0020G03f, mRNA sequence /clone=HVSMEi0020G03f /gb=BG368720
Os.47321
Oryza sativa Japonica Group cDNA clone:002-150-E07, full insert sequence /gb=AK108743
Os.54767
Oryza sativa Japonica Group cDNA clone:002-114-G07, full insert sequence /cds=p(333,1643) /gb=AK106720
Sbi.12353
PI1_51_H09.g1_A002 Pathogen induced 1 (PI1) Sorghum bicolor cDNA, mRNA sequence /gb=BE596060

Domain Architecture

Pre-SET PF05033 GRMZM2G172427_P01
DomainStartEndBit scoreE-value
Pre-SET13051437391.8e-08
SET143915851413.7e-39

Sequences