Plant Transcription factor database - Universität Potsdam
version: 3.0

Gene model: GRMZM2G178791_P01

Identification

Species:
Zea mays
Gene model
GRMZM2G178791_P01
Family
Trihelix

Genome Databases

Orthologs and co-orthologs (in-paralogs)

Look for sequence homologs using SIMAP@MIPS

SIMAP

Ortholog identification by INPARANOID

Arabidopsis lyrata

897310 Score: 1

Zea mays

GRMZM2G157219_P01 Score: 1
GRMZM2G157219_P02 Score: 1
GRMZM2G178791_P01 Score: 1
GRMZM2G178791_P02 Score: 1

Carica papaya

evm.TU.supercontig_7.70 Score: 1

Zea mays

GRMZM2G178791_P01 Score: 1
GRMZM2G178791_P02 Score: 1

Zea mays

GRMZM2G157219_P01 Score: 1
GRMZM2G157219_P02 Score: 1
GRMZM2G178791_P01 Score: 0.952
GRMZM2G178791_P02 Score: 0.952

Oryza sativa subsp. japonica

LOC_Os05g48690.1 Score: 1
LOC_Os05g48690.2 Score: 1

Physcomitrella patens

65143 Score: 1

Zea mays

GRMZM2G157219_P01 Score: 1
GRMZM2G157219_P02 Score: 1
GRMZM2G178791_P01 Score: 0.986
GRMZM2G178791_P02 Score: 0.986

Populus trichocarpa

564061 Score: 1

Zea mays

GRMZM2G157219_P01 Score: 1
GRMZM2G157219_P02 Score: 1
GRMZM2G178791_P01 Score: 0.981
GRMZM2G178791_P02 Score: 0.981

Selaginella moellendorffii

68039 Score: 1
68041 Score: 1

Zea mays

GRMZM2G157219_P01 Score: 1
GRMZM2G157219_P02 Score: 1
GRMZM2G178791_P01 Score: 0.981
GRMZM2G178791_P02 Score: 0.981

Zea mays

GRMZM2G157219_P01 Score: 1
GRMZM2G157219_P02 Score: 1
GRMZM2G178791_P01 Score: 0.981
GRMZM2G178791_P02 Score: 0.981

Vitis vinifera

GSVIVP00035872001 Score: 1

Expression data

Expressed Sequence Tags

Hv.11971
HX05E19r HX Hordeum vulgare subsp. vulgare cDNA clone HX05E19 5-PRIME, mRNA sequence /clone=HX05E19 /clone_end=5' /gb=CA029814
Hv.19013
HVSMEg0013J17f Hordeum vulgare pre-anthesis spike EST library HVcDNA0008 (white to yellow anther) Hordeum vulgare subsp. vulgare cDNA clone HVSMEg0013J17f, mRNA sequence /clone=HVSMEg0013J17f /gb=BE060853
Os.35356
Oryza sativa Japonica Group cDNA clone:J033124C04, full insert sequence /cds=p(551,1591) /gb=AK122091
Sbi.10131
PI1_60_G01.g1_A002 Pathogen induced 1 (PI1) Sorghum bicolor cDNA, mRNA sequence /gb=BE596967
Vvi.9457
SBB06784 Inflorescence (VvS11) Vitis vinifera cDNA clone SBB06784, mRNA sequence /clone=SBB06784 /gb=EE104894

Domain Architecture

trihelix trihelix GRMZM2G178791_P01
DomainStartEndBit scoreE-value
trihelix3810889.91.3e-26

Sequences