Plant Transcription factor database - Universität Potsdam
version: 3.0

Gene model: GRMZM2G179024_P01

Identification

Species:
Zea mays
Gene model
GRMZM2G179024_P01
Family
Pseudo ARR-B
3D structure (top 5)
1K66 1W25 2JBA 3GRC 1P6Q
PDB entry:

Genome Databases

Orthologs and co-orthologs (in-paralogs)

Look for sequence homologs using SIMAP@MIPS

SIMAP

Ortholog identification by INPARANOID

Arabidopsis thaliana

AT5G24470.1 Score: 1

Carica papaya

evm.TU.supercontig_193.15 Score: 1

Chlamydomonas reinhardtii

166515 Score: 1

Ostreococcus lucimarinus

29755 Score: 1
41670 Score: 1

Oryza sativa subsp. japonica

LOC_Os09g36220.1 Score: 1
LOC_Os09g36220.2 Score: 1

Ostreococcus tauri

23022 Score: 1

Physcomitrella patens

154145 Score: 1

Populus trichocarpa

755476 Score: 1

Vitis vinifera

GSVIVP00026171001 Score: 1

Expression data

Expressed Sequence Tags

Hv.21000
Hordeum vulgare subsp. vulgare cDNA clone: FLbaf75k13, mRNA sequence /gb=AK250331
Hv.4918
Hordeum vulgare subsp. vulgare cDNA clone: FLbaf137g14, mRNA sequence /gb=AK252005
Mtr.19448
MTYCY38TF JCVI-MT1 Medicago truncatula cDNA 5', mRNA sequence /clone_end=5' /gb=EV256565
Os.80771
Oryza sativa Japonica Group cDNA clone:J013102G21, full insert sequence /cds=p(267,2138) /gb=AK067314
Pba.9585
WS01229.BR_H11 PT-GT-FL-A-3 Populus trichocarpa cDNA clone WS01229_H11 5', mRNA sequence /clone=WS01229_H11 /clone_end=5' /gb=DT473373
Pth.16941
WS01229.BR_H11 PT-GT-FL-A-3 Populus trichocarpa cDNA clone WS01229_H11 5', mRNA sequence /clone=WS01229_H11 /clone_end=5' /gb=DT473373
Sbi.10157
PIC1_53_A05.b1_A002 Pathogen-infected compatible 1 (PIC1) Sorghum bicolor cDNA, mRNA sequence /gb=BM325806
Sbi.6584
PI1_34_G12.g1_A002 Pathogen induced 1 (PI1) Sorghum bicolor cDNA, mRNA sequence /gb=BE366533
Vvi.23600
CA12EI204IIF_C02 Cabernet Sauvignon Leaf - CA12EI Vitis vinifera cDNA clone CA12EI204IIF_C02 5', mRNA sequence /clone=CA12EI204IIF_C02 /clone_end=5' /gb=CA815595

Domain Architecture

Response_reg PF00072 GRMZM2G179024_P01
DomainStartEndBit scoreE-value
Response_reg45159102.81.2e-27
CCT58062488.91.8e-23

Sequences