Plant Transcription factor database - Universität Potsdam
version: 3.0

Gene model: GRMZM2G180162_P01

Identification

Species:
Zea mays
Gene model
GRMZM2G180162_P01
Family
TRAF
3D structure (top 5)
2IF5 2Z8H 1R29 2PPI 2IHC
PDB entry:

Genome Databases

Orthologs and co-orthologs (in-paralogs)

Look for sequence homologs using SIMAP@MIPS

SIMAP

Ortholog identification by INPARANOID

Chlamydomonas reinhardtii

379890 Score: 1

Expression data

Expressed Sequence Tags

Hv.16799
Hordeum vulgare subsp. vulgare cDNA clone: FLbaf150h20, mRNA sequence /gb=AK252289
Hv.19530
AV921229 K. Sato unpublished cDNA library, cv. Haruna Nijo germination shoots Hordeum vulgare subsp. vulgare cDNA clone bags1i05 3', mRNA sequence /clone=bags1i05 /clone_end=3' /gb=AV921229
Os.49110
Oryza sativa Japonica Group cDNA clone:J013089M24, full insert sequence /cds=p(320,1378) /gb=AK067034
Os.49650
Oryza sativa Japonica Group cDNA clone:001-116-F01, full insert sequence /cds=p(715,1140) /gb=AK105288
Os.5294
Oryza sativa Japonica Group cDNA clone:J023080H04, full insert sequence /gb=AK070994
Os.55412
Oryza sativa Japonica Group cDNA clone:002-137-C07, full insert sequence /cds=p(75,1169) /gb=AK108036
Os.78559
Oryza sativa (japonica cultivar-group) Os10g0423600 (Os10g0423600) mRNA, complete cds /cds=p(1,1743) /gb=NM_001071171
Os.86352
Oryza sativa (japonica cultivar-group) Os08g0226800 (Os08g0226800) mRNA, complete cds /cds=p(1,1095) /gb=NM_001067820
Ppa.2468
Physcomitrella patens subsp. patens predicted protein (PHYPADRAFT_143618) mRNA, complete cds /cds=p(1,1191) /gb=XM_001776357
Ppa.4132
Physcomitrella patens subsp. patens predicted protein (PHYPADRAFT_226178) mRNA, complete cds /cds=p(344,1549) /gb=XM_001782953
Sbi.2794
POL1_45_D04.b1_A002 Pollen Sorghum bicolor cDNA clone POL1_45_D04_A002 3', mRNA sequence /clone=POL1_45_D04_A002 /clone_end=3' /gb=CF487657 /gi=34516526

Domain Architecture

BTB PF00651 GRMZM2G180162_P01
DomainStartEndBit scoreE-value
BTB1713189.71e-23

Sequences