Plant Transcription factor database - Universität Potsdam
version: 3.0

Gene model: GSVIVP00000415001

Identification

Species:
Vitis vinifera
Gene model
GSVIVP00000415001
Family
ARID
3D structure (top 5)
2OX0 2W2I 2JRZ 2CXY 2EQY
PDB entry:

Genome Databases

Orthologs and co-orthologs (in-paralogs)

Look for sequence homologs using SIMAP@MIPS

SIMAP

Ortholog identification by INPARANOID

Cyanidioschyzon merolae

CMT461C Score: 1

Chlorella sp. NC64A

21253 Score: 1

Micromonas pusilla CCMP1545

19881 Score: 1

Micromonas sp. RCC299

56462 Score: 1

Oryza sativa subsp. japonica

LOC_Os03g05680.1 Score: 1

Ostreococcus tauri

34223 Score: 1

Physcomitrella patens

93001 Score: 1

Selaginella moellendorffii

956 Score: 1

Zea mays

GRMZM2G165452_P05 Score: 1

Expression data

Expressed Sequence Tags

At.22811
Arabidopsis thaliana transcription factor jumonji (jmjC) domain-containing protein (AT1G63490) mRNA, complete cds /cds=p(85,3435) /gb=NM_105028
At.53035
Arabidopsis thaliana MEE27 (maternal effect embryo arrest 27); transcription factor (MEE27) mRNA, complete cds /cds=p(1,2421) /gb=NM_129041
Hv.16169
Hordeum vulgare subsp. vulgare cDNA clone: FLbaf124d14, mRNA sequence /gb=AK253132
Os.10868
Oryza sativa Japonica Group cDNA clone:J023127H13, full insert sequence /cds=p(200,3916) /gb=AK121381

Domain Architecture

JmjN PF02375 GSVIVP00000415001
DomainStartEndBit scoreE-value
JmjN326566.97.7e-17
ARID1022033.77.6e-05
PHD19424252.91.2e-12
JmjC365481208.61.6e-59

Sequences

protein sequence
transcript sequence