Plant Transcription factor database - Universität Potsdam
version: 3.0

Gene model: GSVIVP00000471001

Identification

Species:
Vitis vinifera
Gene model
GSVIVP00000471001
Family
NAC
3D structure (top 5)
1UT7
PDB entry:

Genome Databases

Orthologs and co-orthologs (in-paralogs)

Look for sequence homologs using SIMAP@MIPS

SIMAP

Ortholog identification by INPARANOID

Arabidopsis lyrata

313859 Score: 1

Arabidopsis thaliana

AT1G33060.1 Score: 1
AT1G33060.2 Score: 1

Carica papaya

evm.TU.supercontig_37.110 Score: 1

Sorghum bicolor

5058431 Score: 1

Zea mays

GRMZM2G003715_P01 Score: 1

Expression data

Expressed Sequence Tags

At.1032
Arabidopsis thaliana putative NAC2 protein (At3g49530) mRNA, complete cds /cds=p(197,1606) /gb=AY059734
At.20114
Arabidopsis thaliana ANAC050; transcription factor (ANAC050) mRNA, complete cds /cds=p(63,1406) /gb=NM_111883
At.32955
Arabidopsis thaliana ANAC071 (Arabidopsis NAC domain containing protein 71); transcription factor (ANAC071) mRNA, complete cds /cds=p(1,789) /gb=NM_117908
At.41017
Arabidopsis thaliana ANAC045 (Arabidopsis NAC domain containing protein 45); transcription factor (ANAC045) mRNA, complete cds /cds=p(1,1440) /gb=NM_111190
At.50709
Arabidopsis thaliana ANAC086 (Arabidopsis NAC domain containing protein 86); transcription factor (ANAC086) mRNA, complete cds /cds=p(1,1431) /gb=NM_121732
At.51256
Arabidopsis thaliana ANAC096 (Arabidopsis NAC domain containing protein 96); transcription factor (ANAC096) mRNA, complete cds /cds=p(355,1233) /gb=NM_124029
At.53361
87-L022147-065-007-G11-SeLA MPIZ-ADIS-065d Arabidopsis thaliana cDNA clone 007-G11, mRNA sequence /clone=007-G11 /gb=DR749828
At.65025
Arabidopsis thaliana TIP mRNA, complete cds /cds=p(198,1553) /gb=AF281062
Hv.27177
Hordeum vulgare subsp. vulgare cDNA clone: FLbaf127o16, mRNA sequence /gb=AK251493
Hv.4825
Hordeum vulgare subsp. vulgare cDNA clone: FLbaf54a18, mRNA sequence /gb=AK249749
Mtr.12198
EST611135 KVKC Medicago truncatula cDNA clone pKVKC-7D7, mRNA sequence /clone=pKVKC-7D7 /gb=BQ165266
Mtr.8273
EST645259 GPOD Medicago truncatula cDNA clone GPOD-34Z35, mRNA sequence /clone=GPOD-34Z35 /gb=CB066636
Os.83155
Oryza sativa Japonica Group RIM1 mRNA for NAC protein, complete cds /cds=p(1,1953) /gb=AB265821
Os.8787
Oryza sativa (indica cultivar-group) cDNA clone:OSIGCRA203B11, full insert sequence /gb=CT832968
Os.89249
Oryza sativa Japonica Group cDNA clone:002-104-B01, full insert sequence /cds=p(63,1142) /gb=AK064178
Os.89536
CR290197 Oryza sativa library (Han B) Oryza sativa cDNA clone y787d06p5, mRNA sequence /clone=y787d06p5 /gb=CR290197
Pth.11862
F111P59.3pR Populus flower cDNA library Populus trichocarpa cDNA clone F111P59 3', mRNA sequence /clone=F111P59 /clone_end=3' /gb=CK091605
Vvi.7895
VV_PEd0017f05.g1 Vitis vinifera cv. perlette LibD Vitis vinifera cDNA, mRNA sequence /gb=EV241401

Domain Architecture

NAM PF02365 GSVIVP00000471001
DomainStartEndBit scoreE-value
NAM9139314.12.9e-91

Sequences