Plant Transcription factor database - Universität Potsdam
version: 3.0

Gene model: GSVIVP00000504001

Identification

Species:
Vitis vinifera
Gene model
GSVIVP00000504001
Family
NAC
3D structure (top 5)
1UT7
PDB entry:

Genome Databases

Orthologs and co-orthologs (in-paralogs)

Look for sequence homologs using SIMAP@MIPS

SIMAP

Ortholog identification by INPARANOID

Carica papaya

evm.TU.supercontig_37.89 Score: 1

Expression data

Expressed Sequence Tags

At.36457
Arabidopsis thaliana clone RAFL15-02-N12 (R20259) putative NAM (no apical meristem) protein (At2g46770) mRNA, complete cds /cds=p(95,1192) /gb=BT002931
At.50052
Arabidopsis thaliana ANAC033; transcription factor (ANAC033) mRNA, complete cds /cds=p(295,1410) /gb=NM_106606
At.51889
Arabidopsis thaliana ANAC012/NST3/SND1 (ARABIDOPSIS NAC DOMAIN CONTAINING PROTEIN 12); specific transcriptional repressor/ transcription activator/> (ANAC012/NST3/SND1) mRNA, complete cds /cds=p(1,1077) /gb=NM_103011
Hv.26059
Hordeum vulgare subsp. vulgare cDNA clone: FLbaf176e18, mRNA sequence /gb=AK248449
Hv.27222
Hordeum vulgare subsp. vulgare cDNA clone: FLbaf17a09, mRNA sequence /gb=AK249120
Os.10581
Oryza sativa Japonica Group cDNA clone:002-148-G11, full insert sequence /gb=AK109860
Os.4386
Oryza sativa Japonica Group cDNA clone:J033087M22, full insert sequence /cds=p(1150,1809) /gb=AK102224
Os.51831
Oryza sativa Japonica Group cDNA clone:001-123-E07, full insert sequence /cds=p(246,1325) /gb=AK063943
Os.56173
Oryza sativa Japonica Group cDNA clone:002-124-A06, full insert sequence /cds=p(663,1241) /gb=AK109552
Pth.12425
Populus trichocarpa clone WS0117_G20 unknown mRNA /cds=p(179,1447) /gb=EF146350
Ptp.1747
G126P45.5pR Populus tension wood cDNA library Populus tremula x Populus tremuloides cDNA clone G126P45 5', mRNA sequence /clone=G126P45 /clone_end=5' /gb=CK103670

Domain Architecture

NAM PF02365 GSVIVP00000504001
DomainStartEndBit scoreE-value
NAM11140296.17.6e-86

Sequences