Plant Transcription factor database - Universität Potsdam
version: 3.0

Gene model: GSVIVP00000604001

Identification

Species:
Vitis vinifera
Gene model
GSVIVP00000604001
Family
C2H2
3D structure (top 5)
2I13 2CSH 2DLQ 1TF6 2DMD
PDB entry:

Genome Databases

Orthologs and co-orthologs (in-paralogs)

Look for sequence homologs using SIMAP@MIPS

SIMAP

Ortholog identification by INPARANOID

Arabidopsis lyrata

481690 Score: 1

Arabidopsis thaliana

AT2G28200.1 Score: 1

Carica papaya

evm.TU.supercontig_92.92 Score: 1

Populus trichocarpa

576790 Score: 1

Sorghum bicolor

5005098 Score: 1

Zea mays

GRMZM2G089721_P01 Score: 1

Expression data

Expressed Sequence Tags

Pba.10191
WS01917.C21_P03 PT-DX-N-A-10 Populus trichocarpa cDNA clone WS01917_P03 3', mRNA sequence /clone=WS01917_P03 /clone_end=3' /gb=DT469489
Pba.2295
WS01228.B21_G16 PT-GT-FL-A-3 Populus trichocarpa cDNA clone WS01228_G16 3', mRNA sequence /clone=WS01228_G16 /clone_end=3' /gb=DT476127
Pth.10191
WS01917.C21_P03 PT-DX-N-A-10 Populus trichocarpa cDNA clone WS01917_P03 3', mRNA sequence /clone=WS01917_P03 /clone_end=3' /gb=DT469489
Pth.2295
Populus trichocarpa clone WS01228_G16 unknown mRNA /cds=p(135,1067) /gb=EF147153
Ptp.12454
R025G08.5pR Populus root cDNA library Populus tremula x Populus tremuloides cDNA clone V060G08 5', mRNA sequence /clone=V060G08 /clone_end=5' /gb=DN497685
Vvi.12012
SCB03919 Inflorescence with GA3 (VvS12) Vitis vinifera cDNA clone SCB03919, mRNA sequence /clone=SCB03919 /gb=EE106945
Vvi.12262
WIN1028.C21_E15 Muscat Hamburg post-veraison pericarp normalized (WIN10) Vitis vinifera cDNA clone WIN1028_E15 3', mRNA sequence /clone=WIN1028_E15 /clone_end=3' /gb=EC975476

Domain Architecture

zf-C2H2 PF00096 GSVIVP00000604001
DomainStartEndBit scoreE-value
zf-C2H2177199220.0025

Sequences