Plant Transcription factor database - Universität Potsdam
version: 3.0

Gene model: GSVIVP00000877001

Identification

Species:
Vitis vinifera
Gene model
GSVIVP00000877001
Family
NAC
3D structure (top 5)
1UT7
PDB entry:

Genome Databases

Orthologs and co-orthologs (in-paralogs)

Look for sequence homologs using SIMAP@MIPS

SIMAP

Ortholog identification by INPARANOID

Arabidopsis lyrata

873225 Score: 1

Arabidopsis thaliana

AT3G17730.1 Score: 1

Oryza sativa subsp. japonica

LOC_Os09g38000.1 Score: 1

Physcomitrella patens

26565 Score: 1

Populus trichocarpa

265732 Score: 1

Sorghum bicolor

4161810 Score: 1

Selaginella moellendorffii

68150 Score: 1

Zea mays

AC210271.3_FGP053 Score: 1

Expression data

Expressed Sequence Tags

At.21933
Arabidopsis thaliana ANAC053 (Arabidopsis NAC domain containing protein 53); transcription factor (ANAC053) mRNA, complete cds /cds=p(229,1878) /gb=NM_111885
At.32955
Arabidopsis thaliana ANAC071 (Arabidopsis NAC domain containing protein 71); transcription factor (ANAC071) mRNA, complete cds /cds=p(1,789) /gb=NM_117908
At.37235
Arabidopsis thaliana mRNA for hypothetical protein, complete cds, clone: RAFL23-20-J17 /cds=p(64,969) /gb=AK176278
At.41017
Arabidopsis thaliana ANAC045 (Arabidopsis NAC domain containing protein 45); transcription factor (ANAC045) mRNA, complete cds /cds=p(1,1440) /gb=NM_111190
At.50709
Arabidopsis thaliana ANAC086 (Arabidopsis NAC domain containing protein 86); transcription factor (ANAC086) mRNA, complete cds /cds=p(1,1431) /gb=NM_121732
At.51256
Arabidopsis thaliana ANAC096 (Arabidopsis NAC domain containing protein 96); transcription factor (ANAC096) mRNA, complete cds /cds=p(355,1233) /gb=NM_124029
At.53361
87-L022147-065-007-G11-SeLA MPIZ-ADIS-065d Arabidopsis thaliana cDNA clone 007-G11, mRNA sequence /clone=007-G11 /gb=DR749828
Hv.23644
Hordeum vulgare subsp. vulgare mRNA for transcription factor, complete cds /cds=p(11,1306) /gb=AB362161
Hv.27177
Hordeum vulgare subsp. vulgare cDNA clone: FLbaf127o16, mRNA sequence /gb=AK251493
Mtr.12198
EST611135 KVKC Medicago truncatula cDNA clone pKVKC-7D7, mRNA sequence /clone=pKVKC-7D7 /gb=BQ165266
Os.13570
NEW_RNG33-F03-T7 Rice mixture of leaf, root, panicle Oryza sativa (japonica cultivar-group) cDNA, mRNA sequence /gb=EE590715
Os.21932
Oryza sativa (indica cultivar-group) cDNA clone:OSIGCPI241J15, full insert sequence /gb=CT833247
Os.4387
Oryza sativa (indica cultivar-group) cDNA clone:OSIGCRA109D13, full insert sequence /gb=CT830886
Os.83155
Oryza sativa Japonica Group RIM1 mRNA for NAC protein, complete cds /cds=p(1,1953) /gb=AB265821
Pba.3225
WS01124.BR_C05 PT-P-FL-A-2 Populus trichocarpa cDNA clone WS01124_C05 5', mRNA sequence /clone=WS01124_C05 /clone_end=5' /gb=DT496679
Ppa.19514
CBAW1464.fwd CBAW Physcomitrella patens subsp. patens Gransden - dessicated (H) Physcomitrella patens subsp. patens cDNA clone CBAW1464 5', mRNA sequence /clone=CBAW1464 /clone_end=5' /gb=FC431164
Pth.13320
WS9991.BR_C07 PT-P-FL-A-2 Populus trichocarpa cDNA clone WS0119_B19 5', mRNA sequence /clone=WS0119_B19 /clone_end=5' /gb=DT499717
Pth.3225
Populus trichocarpa clone WS01124_C05 unknown mRNA /cds=p(82,1404) /gb=EF145394
Sbi.17975
OX1_38_A01.g1_A002 Oxidatively-stressed leaves and roots Sorghum bicolor cDNA clone OX1_38_A01_A002 5', mRNA sequence /clone=OX1_38_A01_A002 /clone_end=5' /gb=CN135689 /gi=45968055

Domain Architecture

NAM PF02365 GSVIVP00000877001
DomainStartEndBit scoreE-value
NAM6134303.83.6e-88

Sequences