Plant Transcription factor database - Universität Potsdam
version: 3.0

Gene model: GSVIVP00002882001

Identification

Species:
Vitis vinifera
Gene model
GSVIVP00002882001
Family
RWP-RK
3D structure (top 5)
1IP9
PDB entry:

Genome Databases

Orthologs and co-orthologs (in-paralogs)

Look for sequence homologs using SIMAP@MIPS

SIMAP

Ortholog identification by INPARANOID

Arabidopsis lyrata

472297 Score: 1

Arabidopsis thaliana

AT1G20640.1 Score: 1
AT1G20640.2 Score: 1

Carica papaya

evm.TU.supercontig_26.187 Score: 1

Micromonas pusilla CCMP1545

39571 Score: 1

Vitis vinifera

GSVIVP00002882001 Score: 1
GSVIVP00036264001 Score: 1

Micromonas sp. RCC299

56348 Score: 1

Oryza sativa subsp. japonica

LOC_Os03g03900.1 Score: 1

Populus trichocarpa

798353 Score: 1

Sorghum bicolor

5050275 Score: 1

Zea mays

GRMZM2G109509_P02 Score: 1
GRMZM2G109509_P01 Score: 0.986

Expression data

Expressed Sequence Tags

At.41699
Arabidopsis thaliana putative nodule inception protein (At1g20640) mRNA, complete cds /cds=p(302,2836) /gb=AY091015
At.48379
Arabidopsis thaliana RWP-RK domain-containing protein (AT1G76350) mRNA, complete cds /cds=p(213,2639) /gb=NM_106284
Sbi.9647
ABA1_1_B11.g1_A012 Abscisic acid-treated seedlings Sorghum bicolor cDNA clone ABA1_1_B11_A012 5', mRNA sequence /clone=ABA1_1_B11_A012 /clone_end=5' /gb=CB924743 /gi=30161014
Vvi.15775
WIN0541.C21_K10 Cab Sauv flower, leaf and root normalized (WIN05) Vitis vinifera cDNA clone WIN0541_K10 3', mRNA sequence /clone=WIN0541_K10 /clone_end=3' /gb=EC947436

Domain Architecture

RWP-RK PF02042 GSVIVP00002882001
DomainStartEndBit scoreE-value
RWP-RK546597102.71.2e-27
PB176985289.31.3e-23

Sequences