Plant Transcription factor database - Universität Potsdam
version: 3.0

Gene model: GSVIVP00002964001

Identification

Species:
Vitis vinifera
Gene model
GSVIVP00002964001
Family
PLATZ

Genome Databases

Orthologs and co-orthologs (in-paralogs)

Look for sequence homologs using SIMAP@MIPS

SIMAP

Ortholog identification by INPARANOID

Arabidopsis lyrata

889557 Score: 1

Arabidopsis thaliana

AT1G21000.1 Score: 1
AT1G21000.2 Score: 1

Populus trichocarpa

831731 Score: 1
710669 Score: 0.928

Expression data

Expressed Sequence Tags

At.19392
Arabidopsis thaliana zinc-binding family protein (AT1G76590) mRNA, complete cds /cds=p(185,922) /gb=NM_106309
At.2047
Arabidopsis thaliana zinc-binding family protein (AT4G17900) mRNA, complete cds /cds=p(177,860) /gb=NM_117900
At.21086
Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH67ZA02 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) /gb=BX816755
At.52004
Arabidopsis thaliana zinc-binding family protein (AT1G43000) mRNA, complete cds /cds=p(1,651) /gb=NM_103459
Mtr.8325
Medicago truncatula clone MTYF5_F6_F7_F81G-L-13 unknown mRNA /cds=p(144,866) /gb=BT051885
Os.24117
Oryza sativa Japonica Group cDNA clone:J013030D23, full insert sequence /cds=p(216,977) /gb=AK065620
Pba.880
WS02520.B21_M16 PT-MB-N-A-15 Populus trichocarpa cDNA clone WS02520_M16 3', mRNA sequence /clone=WS02520_M16 /clone_end=3' /gb=DT482790
Ppa.11391
CAYY4998.fwd CAYY Physcomitrella patens subsp. patens Villersexel - regular (H) Physcomitrella patens subsp. patens cDNA clone CAYY4998 5', mRNA sequence /clone=CAYY4998 /clone_end=5' /gb=FC366904
Pth.880
WS02518.B21_F22 PT-MB-N-A-15 Populus trichocarpa cDNA clone WS02518_F22 3', mRNA sequence /clone=WS02518_F22 /clone_end=3' /gb=CV243262
Ptp.1985
A060P77.3pR Hybrid aspen plasmid library Populus tremula x Populus tremuloides cDNA clone A060P77 3', mRNA sequence /clone=A060P77 /clone_end=3' /gb=CK088584
Ptp.4911
R014G05 Populus root cDNA library Populus tremula x Populus tremuloides cDNA 5 prime, mRNA sequence /clone_end=5' /gb=BU884730
Sbi.12288
ANR1_15_C02.g1_A002 Anaerobic roots Sorghum bicolor cDNA clone ANR1_15_C02_A002 5', mRNA sequence /clone=ANR1_15_C02_A002 /clone_end=5' /gb=CX609916 /gi=57808636
Vvi.611
VV_PEb19g10.b1 Vitis vinifera cv. perlette LibB Vitis vinifera cDNA, mRNA sequence /gb=EV235362

Domain Architecture

PLATZ PF04640 GSVIVP00002964001
DomainStartEndBit scoreE-value
PLATZ293211.12.9e-60

Sequences