Plant Transcription factor database - Universität Potsdam
version: 3.0

Gene model: GSVIVP00003042001

Identification

Species:
Vitis vinifera
Gene model
GSVIVP00003042001
Family
NAC
3D structure (top 5)
1UT7
PDB entry:

Genome Databases

Orthologs and co-orthologs (in-paralogs)

Look for sequence homologs using SIMAP@MIPS

SIMAP

Ortholog identification by INPARANOID

Carica papaya

evm.TU.supercontig_2586.1 Score: 1

Physcomitrella patens

46369 Score: 1

Populus trichocarpa

580954 Score: 1
758848 Score: 1

Selaginella moellendorffii

67638 Score: 1

Expression data

Expressed Sequence Tags

At.23603
Arabidopsis thaliana ANAC010 (Arabidopsis NAC domain containing protein 10); transcription factor (ANAC010) mRNA, complete cds /cds=p(79,1023) /gb=NM_102615
At.31945
Arabidopsis thaliana ANAC075 (Arabidopsis NAC domain containing protein 75); transcription factor (ANAC075) mRNA, complete cds /cds=p(1,1497) /gb=NM_119067
At.41316
Arabidopsis thaliana ANAC008 (Arabidopsis NAC domain containing protein 8); transcription factor (ANAC008) mRNA, complete cds /cds=p(261,1610) /gb=NM_102369
At.54535
Arabidopsis thaliana ANAC073 (Arabidopsis NAC domain containing protein 73); transcription factor (ANAC073) mRNA, complete cds /cds=p(355,1272) /gb=NM_118992
At.55590
Arabidopsis thaliana ANAC099 (Arabidopsis NAC domain containing protein 99); transcription factor (ANAC099) mRNA, complete cds /cds=p(1,1161) /gb=NM_125045
Hv.4641
HVSMEn0023A06f Hordeum vulgare rachis EST library HVcDNA0015 (normal) Hordeum vulgare subsp. vulgare cDNA clone HVSMEn0023A06f, mRNA sequence /clone=HVSMEn0023A06f /gb=BI960052
Mtr.15072
EST508298 HOGA Medicago truncatula cDNA clone pHOGA-9B19 5' end, mRNA sequence /clone=pHOGA-9B19 /clone_end=5' /gb=BG646679
Mtr.18950
EST645956 HOGA Medicago truncatula cDNA clone HOGA-27C3, mRNA sequence /clone=HOGA-27C3 /gb=CB893164
Mtr.22903
Medicago truncatula clone MTYFD_FE_FF_FG1G-P-18 unknown mRNA /cds=p(26,1347) /gb=BT052714
Mtr.8224
EST645710 HOGA Medicago truncatula cDNA clone HOGA-26M9, mRNA sequence /clone=HOGA-26M9 /gb=CB892918
Os.27469
Oryza sativa Japonica Group cDNA clone:J023120G13, full insert sequence /cds=p(1112,1810) /gb=AK121339
Os.50585
Oryza sativa Japonica Group cDNA clone:J033107L05, full insert sequence /cds=p(344,1525) /gb=AK121953
Os.53950
Oryza sativa Japonica Group cDNA clone:J023145A15, full insert sequence /cds=p(332,1276) /gb=AK100983
Os.88173
Oryza sativa Japonica Group cDNA, clone: J075175B09, full insert sequence /cds=p(152,1198) /gb=AK242227
Os.92004
OSIIEb08H04.f OSIIEb Oryza sativa (indica cultivar-group) cDNA clone OSIIEb08H04 5', mRNA sequence /clone=OSIIEb08H04 /clone_end=5' /gb=CB631107
Os.9851
Oryza sativa Japonica Group cDNA clone:J033108B03, full insert sequence /cds=p(184,1185) /gb=AK102794
Ptp.7947
UR109TA06.5pR Populus root cDNA library Populus tremula x Populus tremuloides cDNA clone UR109TA06 5', mRNA sequence /clone=UR109TA06 /clone_end=5' /gb=DN501519
Ptp.9046
G119P90.5pR Populus tension wood cDNA library Populus tremula x Populus tremuloides cDNA clone G119P90 5', mRNA sequence /clone=G119P90 /clone_end=5' /gb=CK103489
Vvi.2656
CAbud0002_IVR_E02 Vitis vinifera cv. cabernet sauvignon (Clone 8) Bud - CABUD Vitis vinifera cDNA clone CAbud0002_IVR_E02 3', mRNA sequence /clone=CAbud0002_IVR_E02 /clone_end=3' /gb=CF511690

Domain Architecture

NAM PF02365 GSVIVP00003042001
DomainStartEndBit scoreE-value
NAM60201191.32.7e-54

Sequences