Plant Transcription factor database - Universität Potsdam
version: 3.0

Gene model: GSVIVP00003102001

Identification

Species:
Vitis vinifera
Gene model
GSVIVP00003102001
Family
C3H
3D structure (top 5)
3GFC 2VDU 3EI4 1PGU 2PBI
PDB entry:

Genome Databases

Orthologs and co-orthologs (in-paralogs)

Look for sequence homologs using SIMAP@MIPS

SIMAP

Ortholog identification by INPARANOID

Arabidopsis lyrata

495266 Score: 1

Arabidopsis thaliana

AT4G25440.1 Score: 1

Carica papaya

evm.TU.supercontig_4.210 Score: 1

Oryza sativa subsp. japonica

LOC_Os02g45480.1 Score: 1

Physcomitrella patens

3694 Score: 1

Populus trichocarpa

422910 Score: 1

Expression data

Expressed Sequence Tags

At.29648
Arabidopsis thaliana WD-40 repeat family protein / zfwd2 protein (ZFWD2), putative (AT5G51980) mRNA, complete cds /cds=p(181,1494) /gb=NM_124577
Os.23123
Oryza sativa Japonica Group cDNA clone:J033090J15, full insert sequence /cds=p(295,1320) /gb=AK102324
Pth.2321
WS0231.B21_O21 PT-MB-A-13 Populus trichocarpa cDNA clone WS0231_O21 3', mRNA sequence /clone=WS0231_O21 /clone_end=3' /gb=CV239284
Ptp.815
T003G04 Populus apical shoot cDNA library Populus tremula x Populus tremuloides cDNA 5 prime, mRNA sequence /clone_end=5' /gb=BU830086
Vvi.1545
EST 3442 Veraison Grape berries Lambda Zap II Library Vitis vinifera cDNA clone TT273H07 3', mRNA sequence /clone=TT273H07 /clone_end=3' /gb=BQ794504

Domain Architecture

zf-CCCH PF00642 GSVIVP00003102001
DomainStartEndBit scoreE-value
zf-CCCH20447.90.14
zf-CCCH141166120.04
WD4017221029.31.6e-05
WD4029533136.51.1e-07
WD4033537129.31.6e-05

Sequences