Plant Transcription factor database - Universität Potsdam
version: 3.0

Gene model: GSVIVP00003738001

Identification

Species:
Vitis vinifera
Gene model
GSVIVP00003738001
Family
MYB-related
3D structure (top 5)
3D7C 2YW5 2YYN 1E6I 2RI7
PDB entry:

Genome Databases

Orthologs and co-orthologs (in-paralogs)

Look for sequence homologs using SIMAP@MIPS

SIMAP

Ortholog identification by INPARANOID

Arabidopsis lyrata

483567 Score: 1

Arabidopsis thaliana

AT2G44430.1 Score: 1

Carica papaya

evm.TU.supercontig_189.23 Score: 1

Oryza sativa subsp. japonica

LOC_Os08g39980.1 Score: 1

Sorghum bicolor

5008192 Score: 1

Zea mays

GRMZM2G022499_P01 Score: 1
GRMZM2G052984_P01 Score: 1

Expression data

Expressed Sequence Tags

Vvi.12053
VV_PEd05h07.b1 Vitis vinifera cv. perlette LibD Vitis vinifera cDNA, mRNA sequence /gb=EV242411
Vvi.23264
VV_PEd05h07.g1 Vitis vinifera cv. perlette LibD Vitis vinifera cDNA, mRNA sequence /gb=EV242412
Vvi.23744
sT7aVVM004O01001 VVM Vitis vinifera cDNA clone VVM004O01001 5' similar to emb_CAN75881.1 hypothetical protein [Vitis vinifera]. Expect = 3e-105, mRNA sequence /clone=VVM004O01001 /clone_end=5' /gb=FC062711

Domain Architecture

Myb_DNA-binding PF00249 GSVIVP00003738001
DomainStartEndBit scoreE-value
Myb_DNA-binding2983391.9e-08
Bromodomain246333514.5e-12
AT_hook552564120.22

Sequences